| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2711 |
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| Symbol | |
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| ID | 5453708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2916492 |
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| End bp | 2917934 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878288 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001413976 |
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| Protein GI | 154253152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0257064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGACA ACCCCGAAGG TGAAGCCATC GAATGCGACG TGCCAGCGCG GCTAGACCGG
CTGCCATGGG GACGCTTCCA TACGCTGGTT GTGGCCGCGC TCGGTATCAC GTGGATACTC
GACGGATTGG AAGTGACGCT GGCGGGGGCT GTCGCCGGCG CGTTGCGGGA GAGCCCGTCG
CTCGACATGA ACGCGTCGGA TATCGGGCTC GCCGCAAGCG CCTATCTTGT CGGCGCGGTT
TTTGGAGGCG TCTTTTTCGG CTGGCTTACC GACAGGTTCG GACGGCGGAA ACTGTTTTTC
ATCACGCTGG CGCTTTACGT TGCTGCGACA ATCGCCACGG CATTTTCCTG GAGCCTTGCG
AGCTTCGCCT TTTTCCGATT TTTGACCGGG GCGGGGATCG GCGGCGAATA CACGGCAATC
AATTCGACAA TCCAGGAACT CATTCCGGCG CGCTTCCGCG GGTGGACCGA TCTTGCGATC
AATGGAAGCT TCTGGCTCGG TGCGGCGCTG GGTGCGGGGT TATCCATCGT CCTTCTCGAC
CCGGACATTG CCGGTGGAGA CCTCGGTTGG CGGCTTTGCT TCTTCATTGG CGGCGTTCTC
GGGCTTTTCA TTTTTGCGAT GCGGTTCTGG CTGCCGGAAA GCCCTCGCTG GCTGATGACG
CATGGACGCG TCGCCGAGGC GAGCGGCATC CTCGCCGATA TCGAGGGGCA GTATCGCAGA
CGGGGGCACG AGCTTGCCGA GGAAGGACTC GAATGCATAA AGCTGCGGCA GCACAGACCG
CTGCGCGTTC GCGAGATTTT CCATACGCTG TTTCAGGTGC ATCGCCGCCG CGCGCTGGTT
GGGCTGGCGC TCATGTCGGC ACAAGCCTTC TTCTACAATG CGATCTTCTT CACCTATGCG
CTGGTGCTGA CGGATTTCTA CGATATTCCG GCGGCGCAGG TCGGCTGGTA CATCCTGCCC
TTCGCGGCGG GGAATTTTTT CGGGCCGCTT ATTCTTGGGC GGCTGTTCGA CACGGTGGGG
CGGCGGATCA TGATCGCATC CACTTACGCA ATATCGGGCG TATTGCTTGC CTGCAGTGGC
TATATGTTCG CCGAAGGGCT GCTGACCGCG CAGACACAGA CGATTGCCTG GATGGTGATC
TTCTTCTTCG CGTCAGCGGC GGCGAGCTCC GCCTATCTGA CAGTGAGCGA GACCTTTCCG
CTGGAAATGC GCGCGGTGGC GATTGCCGTT TTCTACGCCG TTGGGACGGG GCTCGGCGGG
GTGGCAGGGC CGGCGCTCTT CGGATGGCTG ATCGAATCCG GCTCGCGCGA CGCGGTGTTC
GGCGGATACC TGGTGGGAGC AGGCTTCATG ACAGCCGCAG CAATCGTGCA GGCGATCTGG
GGCGTTGCCG CGGAACGCCA GGCTCTCGAG ACAGTGACGA AGCCGCTGAG GGCGTGGGAC
TGA
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| Protein sequence | MRDNPEGEAI ECDVPARLDR LPWGRFHTLV VAALGITWIL DGLEVTLAGA VAGALRESPS
LDMNASDIGL AASAYLVGAV FGGVFFGWLT DRFGRRKLFF ITLALYVAAT IATAFSWSLA
SFAFFRFLTG AGIGGEYTAI NSTIQELIPA RFRGWTDLAI NGSFWLGAAL GAGLSIVLLD
PDIAGGDLGW RLCFFIGGVL GLFIFAMRFW LPESPRWLMT HGRVAEASGI LADIEGQYRR
RGHELAEEGL ECIKLRQHRP LRVREIFHTL FQVHRRRALV GLALMSAQAF FYNAIFFTYA
LVLTDFYDIP AAQVGWYILP FAAGNFFGPL ILGRLFDTVG RRIMIASTYA ISGVLLACSG
YMFAEGLLTA QTQTIAWMVI FFFASAAASS AYLTVSETFP LEMRAVAIAV FYAVGTGLGG
VAGPALFGWL IESGSRDAVF GGYLVGAGFM TAAAIVQAIW GVAAERQALE TVTKPLRAWD
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