| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2668 |
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| Symbol | |
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| ID | 5454215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2868744 |
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| End bp | 2870702 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878245 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001413933 |
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| Protein GI | 154253109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.107403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGC TGAAACTTCC AGACGGTTCC GTTCGCGAGC ATGAAGTGCC GCTCGACGGG
CTCGCCTTTG CCGAGAGCAT CGCGAAGTCG CTGGCGAAGA AGGCGGTCGC GATCAAGATC
GACGGCCAGA TGAAAGACCT CTCCACGGTG ATCGACCGCG ATGCCGAGGT GGAGATCGTG
ACGCGCGAGA CGCCGGACGG CGTCGACCTG CTGCGCCACG ATGCCTCGCA TGTGATGGCG
GAAGCCGTGC AGGAGCTTTT TCCGGGCACG CAGGTGACGA TCGGGCCGGT GATCGAGAAC
GGCTTTTATT ACGACTTCGC GCGGGCAGAG CCCTTCAAGG CGGAAGACCT CGAGAAGATC
GAGCAGCGGA TGCGCGAGAT CGTGGACCGC GACGAGACGA TCACGCGGGA AGTGTGGGAC
CGCGACGCGG CGGTCGAGTA TTTCAAGAAG ATCGGCGAAA TCTACAAGGC GGAGATCATT
GCCTCCATTC CGGCGGGCGA GCAGGTGTCC GTCTACCGGC AGGGGAACTG GCTCGATCTC
TGCCGGGGAC CGCATCTGCC CTCGACGGGG AAGCTCGGCA AGGCGTTCAA GCTTACGAAG
CTCGCGGGCG CATACTGGCG GGGCGACAGC CGCAACGAGA TGCTCCAGCG CATCTATGGC
ACGTGCTGGG CGAACGAGAA CGACCTCAAG GCTTACCTCA CGATGGTGGA GGAGGCGGAG
CGCCGCGACC ACCGCAAGAT CGGCCGCGAG ATGGACCTGT TCCATCTGCA GGAGGAAGCG
CAGGGCTCGG TCTTCTGGCA TCCGAAGGGA TGGCGCATCT GGCAGGCGCT GGAACAATAT
GTCCGCAGGC GGATCGACGC GGCGGGCTAT GTGGAAGTGA GGACGCCGCA GCTTCTCGAC
TCGAAGTTCT GGGAGCAGTC CGGCCATTGG GGCAAGTATC GCGAGAACAT GTTCGTGGTG
CCGGACGAGG TGCCGTCGAC GGATGAGGAC GCGCCTGTGC TTTCCGGCAA GGCGAAGCTC
ATGGCGATCA AGCCGATGAA CTGCCCGGCG CATATCCAGA TTTTCAAGCA GGGCGTGAAA
TCCTATCGCG ACCTGCCGCT GCGGATGGCG GAGTTCGGCT GCTGCCACCG CAACGAGCCG
CATGGCGCGC TGCACGGGCT GATGCGTGTG CGCCAGATGA CGCAGGATGA CGCGCATATC
TTCTGCACGG AAGACCAGAT CAAGGAAGAG ACGGAAGCCT TCGTGGCGCT GCTCGAAAGC
GTTTATGAGG ATATGGGCTT CACGGGCACG AAGCTCCGGC TGGCGACGCG GCCCGATGTG
CGGGCCGGTA CGGACGAGAC GTGGGACAAG GCGGAGAAGG CACTTGAAGA GGCGCTGAAG
GCGCTTGGCA AGGAGTTCGA CTTCGCGCCG GGCGAGGGCG CGTTTTACGG GCCGAAGCTC
GAATTCCATC TGCGCGACGC TATCGGCCGC TCATGGCAGC TCGGTACGCT GCAGCTCGAC
TTCGTGCTGC CGGAACGTCT CGATGCGTCC TATATCGGCG AGGACGGCAA CAAGCATCGC
CCGGTGATGC TGCATCGCGC GATTTTGGGT TCGCTCGAAC GCTTCATCGG CATTCTGATC
GAGAATTACG AGGGACGCTT CCCGATGTGG CTGGCGCCGG TTCAGGCGGT GGTGACGACG
ATCACTTCCG ACGCCGACCC CTATGCCGAA GAGATGCTGC AGAAGCTGCG CGATGCAGGC
ATTCGCGCGG AGCTCGATCT TCGCAATGAG AAGATCAACT ACAAGGTGCG CGAGCATTCG
GTGGCGAAGG TGCCGGCGAT CTTCGTGGCC GGCAAGCGCG AGGCGGAGGA GGGGACTGTG
TCGATCCGCC GTCTCGGTTC GCAGCAGCAG CAGACGATGA AGCTCGACGA GGCGATCAAG
GCGCTGGCGG AAGAGGCGAC GCCGCCTGAT ATGCGATAG
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| Protein sequence | MIKLKLPDGS VREHEVPLDG LAFAESIAKS LAKKAVAIKI DGQMKDLSTV IDRDAEVEIV
TRETPDGVDL LRHDASHVMA EAVQELFPGT QVTIGPVIEN GFYYDFARAE PFKAEDLEKI
EQRMREIVDR DETITREVWD RDAAVEYFKK IGEIYKAEII ASIPAGEQVS VYRQGNWLDL
CRGPHLPSTG KLGKAFKLTK LAGAYWRGDS RNEMLQRIYG TCWANENDLK AYLTMVEEAE
RRDHRKIGRE MDLFHLQEEA QGSVFWHPKG WRIWQALEQY VRRRIDAAGY VEVRTPQLLD
SKFWEQSGHW GKYRENMFVV PDEVPSTDED APVLSGKAKL MAIKPMNCPA HIQIFKQGVK
SYRDLPLRMA EFGCCHRNEP HGALHGLMRV RQMTQDDAHI FCTEDQIKEE TEAFVALLES
VYEDMGFTGT KLRLATRPDV RAGTDETWDK AEKALEEALK ALGKEFDFAP GEGAFYGPKL
EFHLRDAIGR SWQLGTLQLD FVLPERLDAS YIGEDGNKHR PVMLHRAILG SLERFIGILI
ENYEGRFPMW LAPVQAVVTT ITSDADPYAE EMLQKLRDAG IRAELDLRNE KINYKVREHS
VAKVPAIFVA GKREAEEGTV SIRRLGSQQQ QTMKLDEAIK ALAEEATPPD MR
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