Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2664 |
Symbol | |
ID | 5453373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2865179 |
End bp | 2865847 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878241 |
Product | GTP cyclohydrolase I |
Protein accession | YP_001413929 |
Protein GI | 154253105 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0302] GTP cyclohydrolase I |
TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0491858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGA AACCCCTAGA CGAGATTGGT CGAATGGACA TGAATGCTGC AGTTGATGGG CTCCGCGCCC AGCCGGATGA CGAGCGCCTG ACGCAAGTCG AGAAGCCGAG CCGCGAGGCG GCGGAAGCCG CCGTGCGCAC CCTCATCGCC TGGGCGGGCG ACAATCCGCA ACGTGAAGGC CTGATCGACA CCCCCGGCCG CGTCGTGCGC GCCTATGAGG AGTTCTTCGA GGGCTACAAC GAAGACCCCT ACAAGGAACT GACCCGCACC TTCGAGGAAG TCGAAGGCTA TAACGACATG GTCATGCTCC GCGACATCAA CATCGAGTCG CATTGCGAGC ATCACATGGT GGCCATTCTC GGCAAGGCAC ATGTCGCCTA TGTCCCGACC AAGAAGGTCG TCGGCATATC GAAGCTCGCC CGCGTCATCG AGATCTATTC CAAGCGCCTC CAGACGCAGG AGACGATGAC GGCCCAGATC GCGGAAACCA TCAATGCCGC GCTCCAGCCG CAAGGCGTCG CCATCCTCAT CGAGGCGAAG CATCAATGCA TGACGACGCG CGGCATCAAG AAGCCGGATG TCGCCACCAT CACCACGCAG TTCACCGGCG TCTTCCGCGA CGATCCCCGC ATGGAAAGCC GGTTCATGCA GATGATCCGC GGATACTGA
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Protein sequence | MAGKPLDEIG RMDMNAAVDG LRAQPDDERL TQVEKPSREA AEAAVRTLIA WAGDNPQREG LIDTPGRVVR AYEEFFEGYN EDPYKELTRT FEEVEGYNDM VMLRDINIES HCEHHMVAIL GKAHVAYVPT KKVVGISKLA RVIEIYSKRL QTQETMTAQI AETINAALQP QGVAILIEAK HQCMTTRGIK KPDVATITTQ FTGVFRDDPR MESRFMQMIR GY
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