| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2662 |
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| Symbol | |
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| ID | 5455418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2863299 |
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| End bp | 2864405 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878239 |
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| Product | patatin |
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| Protein accession | YP_001413927 |
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| Protein GI | 154253103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.31003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT TACGTATGCC CCGCCCAAAA ATCGGCATAG CTCTCGGCGC CGGCGTTGCG
CGCGGCTGGA CCCATATCGG CGTCCTGAAA ACGCTGAAGC GCGCGGGCAT AGAAGCCGAC
ATCGTCTCCG GCACCTCCAT CGGCGCCCTG GTCGGCGGCT GCCTCGTCGC CGACAAGCTC
GAACCGCTTG AGGATTTCGC GCGCTCGCTG ACGCGCCGCC GCATGTTGGG CCTTCTCGAT
TTCCGCTTCC GCTCCTCCGG CCTCATCGGC GATTCCAAGC TCGCCGAACT GATGCGCGAA
CAGCTTGCCG ACATCAACAT CGAAGACCTG AAACAGATTT TCGTCGGCGT CTCGACCGAG
CTCACCACCG GCCATGAACT CTGGCTGCAC AAGGGCAATC TCATTCAGGC GATCCGCGCT
TCCTATGCGC TCCCCGGCGT CTTCCCGCCG GTCGCTGTCG ATGGCCGCTG GCTGATCGAT
GGCGCGCTGG TGAACCCGGT CCCCGTCTCC GTCGCCCGCG CGCTCGGCGC CCGCGTCGTC
ATCGCCGTCA ACCTCAACAC CGATCCCTTC GATCCCGCCG CGCGCCGCCG CGCGCATGAG
GCGGTCTATC CGGGCTATAT CCGCTCCTCG CCGCCGCGCT TGCCCGATGA CGATCTTTTC
CACGACATCG AGGAGAAGAT CGAAGAGGAA CTGAACCTGC AGAATGCCGC GGAACAGGAA
GAAGACGGGG CCGCCACCGA AGGCGCGGCC GAGCTTGTGA AGGACGCCGC TGAAACGACC
CCCGCCGTGG CCGACAGGAT CAGGCAGGGT CTCAAGAATT TCAGCTGGAA ACGCAATCCC
GAAAGCGAGT TGATGCGCCG CGTCGTCGGC GGCAGCCAGC GTGGCCCCGG CATCGCCAGC
GTCATGCTCG CTTCGCTCAA CATTGTGCAG GACAGGCTGG CGCGCATGCG CATGGCGGGC
GACCCGCCCG ACATCATGAT CGCGCCGCAG GTGGGACATC TGAGCCTGCT CGATTTCGAC
CGCGCCGACG AGTTGATAAG GCTCGGCGAG GAGGCCGCCG AGGAGGCGAT CCCTCGGATC
CTCGAAACCA TCGAGATCAT GCAGTAG
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| Protein sequence | MKQLRMPRPK IGIALGAGVA RGWTHIGVLK TLKRAGIEAD IVSGTSIGAL VGGCLVADKL
EPLEDFARSL TRRRMLGLLD FRFRSSGLIG DSKLAELMRE QLADINIEDL KQIFVGVSTE
LTTGHELWLH KGNLIQAIRA SYALPGVFPP VAVDGRWLID GALVNPVPVS VARALGARVV
IAVNLNTDPF DPAARRRAHE AVYPGYIRSS PPRLPDDDLF HDIEEKIEEE LNLQNAAEQE
EDGAATEGAA ELVKDAAETT PAVADRIRQG LKNFSWKRNP ESELMRRVVG GSQRGPGIAS
VMLASLNIVQ DRLARMRMAG DPPDIMIAPQ VGHLSLLDFD RADELIRLGE EAAEEAIPRI
LETIEIMQ
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