| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2656 |
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| Symbol | |
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| ID | 5453609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2857944 |
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| End bp | 2859377 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878233 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_001413921 |
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| Protein GI | 154253097 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC CTTATCCGAA CAATCCGTTT CTACAGGCGA ATTTTGCGCC GGTGCAGGCG
GAGTGCGATG CGCCGGACCT TGTGGTGGTG GAAGGGGAGT TGCCGCGCGA GCTGACGGGC
ACGCTTTACC GCAATGGACC GAACCCGATG TTTCCGCCCC TCGGCAACCA GCATCACTGG
TTTCTCGGTG AAGGCATGAT CCATGCGATC CGCGTGGAGG ACGGGAAGGC GAGCTACCGG
AACAAATGGG TGCATACGGA GCAATACGAA GCGCAGCGGA AGGCGGGCAA GCGCCTGCTG
CCGACGGGCT TCGGCGAAGC GCCGGTGGAG GGCGCGGAGA ATGTGAAGCG TAATGTCGCC
AATACCAATA TCGTCTGGCA CGCCGGCAAG CTGCTGGCGC TGGACGAGGG AAATTCGCCG
GTGGCGATGG ATGGCGACAC GCTGGAAACG GCGGGGCCGT GGACCTTCGA GGGAAAATAC
CAGGGGCCGA TGACGGCGCA TCCGAAGCTC GATCCGCGCA CGGGCGAGAT GCATTTCTTC
GGCTATATGG CGGCAGGCCC GGCGACGCCC GATATTTCCT ACCAGGTGGT GGACCGCAAT
GGCGCGCTCA TCCGCAGCGA CATGTTCAAG GCGCCTTATG CGAGCATGGT GCATGACTTC
ATCGTGACCG ACGAGCATGT GATCTTTCCG ATCTTTCCGG CGACGATCGA CGTCGACCGG
ATCATGAAGG GCGGACCGGT GATCGCATGG GACCCCGATG CAGGCTCGCA TATCGGCATC
ATGGCGCGGG ACGCGAGTGT CGATACGATC CGCTGGTTCA AGGGCGACCC CTGCTATGTC
TATCATCCGA TGAACGCATG GACGACGCAT GAAGGCGGGC GCACGCGGGT CATCGCGGAT
GTGATGAAGT ACAGCCGCGT GCCGCTCTTT CCGAATGCGG ATGGCAGCAA GGCGCCGGCC
AGTCTCACCG ACGAGCAGAG CCTGTTGGTG CGCTGGACGT TCGATCTCGA CAGCAATTCG
GATTCCTACA CGGAAGAAGT TCTGACCGAT CTCGGCGGCG AGTTTCCGCG CTTCGACGAG
CGGTTTGCGG GACACAAGAA CCGGCATGGC TATTACGCCG CGATGCGGCG GCCGAAGGAA
GCGCCGGGTG CGTCCTACGA CACGTTTGTG CATATCGATC TTCAAAGCGG CAAGCGGCGT
GAGTGGGAGC CGGGTGTAGG GAGGTATGTG CACGAGCCGG TTTTCGTGCC GCGCAAGGAG
AGTGCGGCGG AGGGTGACGG CTTTCTGGTG TCGCTCTGCT ACGACACGGC GCGAAACATC
AGCGACTTCA TCGTTCTCGA CACGGACGAT ATTTCCAGGG GCCCGGTGGC GCGAGTAGAG
CTGCCAATGA GGGTGCCTTT CGGCTTCCAC GGGAACTGGC GAAACGGGGC ATAA
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| Protein sequence | MSKPYPNNPF LQANFAPVQA ECDAPDLVVV EGELPRELTG TLYRNGPNPM FPPLGNQHHW
FLGEGMIHAI RVEDGKASYR NKWVHTEQYE AQRKAGKRLL PTGFGEAPVE GAENVKRNVA
NTNIVWHAGK LLALDEGNSP VAMDGDTLET AGPWTFEGKY QGPMTAHPKL DPRTGEMHFF
GYMAAGPATP DISYQVVDRN GALIRSDMFK APYASMVHDF IVTDEHVIFP IFPATIDVDR
IMKGGPVIAW DPDAGSHIGI MARDASVDTI RWFKGDPCYV YHPMNAWTTH EGGRTRVIAD
VMKYSRVPLF PNADGSKAPA SLTDEQSLLV RWTFDLDSNS DSYTEEVLTD LGGEFPRFDE
RFAGHKNRHG YYAAMRRPKE APGASYDTFV HIDLQSGKRR EWEPGVGRYV HEPVFVPRKE
SAAEGDGFLV SLCYDTARNI SDFIVLDTDD ISRGPVARVE LPMRVPFGFH GNWRNGA
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