Gene Plav_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2636 
Symbol 
ID5456986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2840361 
End bp2841185 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID640878213 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001413901 
Protein GI154253077 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.768032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.556061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG CACAGGCGGC GACGCAGGAA GCACAGGAAG TTCTCTACGG CGTGGATGGG 
CACATAGCGA CCATCACGCT CAATGCGCCC GAGCGCATGA ACACGATTTC GGGTCCGATG
CTGAACCAGC TCACAAAGCG TCTTCAGGAA GCGGACGCGG ACCCGGAGGT GCGCTGCGTG
ATCCTTACCG GCGCTGGCCG CGCATTCTGC GCCGGGCTCG ACCTTCGCGC GCAGACACAG
GGCGGCGGCC TTTCGATCGG CTCGAGTGGC GGTGTCACCT CGACGACGCT TGATCTCAAG
AACACGCCGC CCACCGTGCT GCAGGAAATG GAAACGCCGA CGATCTGCGC CGTAAATGGT
GGCGCTGCCG GTTATGGCAT GGATACGGCG CTCGGTTGCG ACATCCGGAT CATGGGCCGG
TCGGCGAAAC TCGCGGCGGC CTTCTGCAAG CGCGGTCTTG TGCCGGAATC GGGCGGCACA
TGGTATCTTC CGCGCCTCAT CGGCTGGTCG AAAGCGGCTG AGCTGATCTT TACGGGCCGT
ACCTTGTCGG CGGATGAAAC GGTCGCATGG GGCCTTGCTT CCGAAGTTGT CGAGGATGCG
GAGCTGATGG CGCGCGCACG CGCGGTTGCC GGAGAGATCG CAGCCAATGC GCCGCTCGCC
GTGAAGGCAG CGAAGCGGAT GATGCGCATG GGGCTCAACG AGCCTTTCCC GGAGCATGTG
CATCACGTCT ATCTTCAGCT TCTGCCGCTG ATGCGGACGG AAGACGTGAA AGAGGGAATG
ATGGCATTCG TCGAGAAACG GGAGCCAAAG TTCAAGGGCA GGTGA
 
Protein sequence
MSQAQAATQE AQEVLYGVDG HIATITLNAP ERMNTISGPM LNQLTKRLQE ADADPEVRCV 
ILTGAGRAFC AGLDLRAQTQ GGGLSIGSSG GVTSTTLDLK NTPPTVLQEM ETPTICAVNG
GAAGYGMDTA LGCDIRIMGR SAKLAAAFCK RGLVPESGGT WYLPRLIGWS KAAELIFTGR
TLSADETVAW GLASEVVEDA ELMARARAVA GEIAANAPLA VKAAKRMMRM GLNEPFPEHV
HHVYLQLLPL MRTEDVKEGM MAFVEKREPK FKGR