Gene Plav_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2618 
Symbol 
ID5456174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2824691 
End bp2825083 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID640878195 
Producthypothetical protein 
Protein accessionYP_001413883 
Protein GI154253059 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.228349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0222891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAAT TGATGTCCGG CAAGGAACAT AAATCTGGCT ATGAAAGTCA TCCCGGCCAT 
CTGTTGCGCC TGATGCCCGC CGGACGGCGC GTCCGTGTCC GCTTCAACGG CGAATTGCTG
GCCGACAGCA CGAGGGCGCT GGAGCTTTTC GAGGGGGAGT ATGCGCCGGT CTTCTACCTG
CCGCGCGAGG ACGTGAAAAT GGAGCTGCTG ACGCCGACCA AAAGCGTGAC CTGGTGCCCG
TTCAAGGGGG AGGCGAGCTA CTGGTCGCTC GAAGGCGAGG GCGGGCAGGA CGCGGTCTGG
TCCTACGAAG ACCCGTTTGT CGAGATGGCC GAGATAAAAG ATTATCTGGC GTTCTATCCC
AACAAGGTCG AGTTCGAGGT GGAGCCGGCC TGA
 
Protein sequence
MGQLMSGKEH KSGYESHPGH LLRLMPAGRR VRVRFNGELL ADSTRALELF EGEYAPVFYL 
PREDVKMELL TPTKSVTWCP FKGEASYWSL EGEGGQDAVW SYEDPFVEMA EIKDYLAFYP
NKVEFEVEPA