| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2533 |
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| Symbol | |
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| ID | 5455565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2734026 |
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| End bp | 2735057 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878110 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001413799 |
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| Protein GI | 154252975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.66716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.672833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAAGC GTATGATCTG GACCGGCGGT GCGGTTGTGC TGGCGGTTCT TGTGGTTGCT
GGAGCCTTTT TCCTGTTTCT GAGAGCGCCT GCCGCTGTTG TCGTGACGCC TTTCCGTGGA
ATGGCGGTAG AGGCGGTTTA CGCGACCGGT ACTGTCGAGC CGGTAAACTA CGCGCGGGTT
GGAGCAAAAA TTTCCGGACG TATCACCAAT GTGCTGAAGC GCGAAGGCGA GCCCGTGGAG
AAGGGCAACA TACTAGCGAT CATCGAACTG GGTGAGGATA TCTCTCGAGT GCATGAGCTC
GAAGCACGAC TCAAACTAGC AAATGCGGAT CTCGACAGGG CGCGTACGTT ACGGCGATCG
GGAAATGTCA GCGAAGCGGC GCTCGACCAG GCGCAAAGCG CACAATCCGC CACCGCAGCG
GCCCTACGCG GCGCAAAGGC GAGGCTTGAC GATCATTTCA TCACCGCACC TATGGCCGGA
ACCGTGTTGC GCTCCGAAAG CCAGATCAGG GTCGGGGACA TGGCGCAGCC GGGGCACGTT
CTCTTCATGG TCGGCGATAC GGCGGAGTTG CAGATCGACG CCGAGGTAGA TGAGGAGGAC
ATTACCAAGG TTGCGCCGGA ACAGGAGGCG CTGATCCGCG CAGATGCCTT TCCGGGCCGG
GCGCTCAAAG GCACGGTAAA AAGGATTACG CCTTATGGCG ATCCCGTGGG CCGCACCTAT
CGTGTCTACA TCTCTCTTCC CGCGGATACG CCGCTGATTT CCGGCATGAC GACGGAAATC
AATATCGTTG TGCGACGTGA GGAAGAGGCC TTGCTGGTGC CGGTATCCGC GCTGTCGGGA
AACTCGGTCT GGACCGTCTC CGGCGGCAGG GCGCGACGGG TGGAGGTCGA GCTGGGCGCG
GTTGGCAGCG ATACGGCGGA AATTCTCTCC GGTCTCCCCG AGGATGCGCT GGTCATCGCG
AATCCTTCAT CCGGTATCGC GGAGGGCGAC AGGGTGCGCG CCGAACAGGC TGCGCCTGAC
GGAACGTCCT AG
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| Protein sequence | MTKRMIWTGG AVVLAVLVVA GAFFLFLRAP AAVVVTPFRG MAVEAVYATG TVEPVNYARV
GAKISGRITN VLKREGEPVE KGNILAIIEL GEDISRVHEL EARLKLANAD LDRARTLRRS
GNVSEAALDQ AQSAQSATAA ALRGAKARLD DHFITAPMAG TVLRSESQIR VGDMAQPGHV
LFMVGDTAEL QIDAEVDEED ITKVAPEQEA LIRADAFPGR ALKGTVKRIT PYGDPVGRTY
RVYISLPADT PLISGMTTEI NIVVRREEEA LLVPVSALSG NSVWTVSGGR ARRVEVELGA
VGSDTAEILS GLPEDALVIA NPSSGIAEGD RVRAEQAAPD GTS
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