| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2512 |
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| Symbol | |
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| ID | 5454962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2712776 |
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| End bp | 2713939 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878089 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413778 |
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| Protein GI | 154252954 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0475648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGAGG CGAATAATCC GAGGGAGATG GCGGGCGCGC CTGCTTCCTG TCATATCGAG
GCCGACGGCA ATGTCCTTCG CATCGAGGCG GCGGGGGACT GGTCTATCGT CCATCTCGAT
CCCGTGGATC GCCAGCTCCG TGCCATCGGT GCCCGGCCCG GCACGGGCCG CGCGATTATC
GGCTTCAAGG ACATCACCCG CTTCGACACC GCCGCCGCCG CCATTCTCGG CCGCACCGCC
GCCCATCTCG GCGAGCAGGG CATCAAGGTC GATTTCGAGG ATGTCAGCGA TGCCCAGCGC
CTCCTTCTCG ACAAGATCGA TTCCTGCGGC ATGCCTGAGC CGGCTCATGT GCCGTGGCGG
CCGCTTCATA TTCAGATCAT CGATAAGATC GGCGCCACCA TGCGCGACAT CGGCGCCGAG
GGGCTCGCCA TGCTCGGCTT CGTCGGCGCG GTCATGGCGA CGGCAGGGCG CACCATCGCC
CGTCCGAGCC GGCTCCGCTG GACGCCCTTC GTGCACCATA TGGAAAAGGC GGGTTTCGAC
GCGCTGCCGC TCGTCTGCCT GCTGACTTTC CTGATCGGCG CGGTCGTGGC GCAGCAGGGC
GCGGTCCAGC TCCGCCAGTT CGGCGCGGAA GTCTTCACGG TCAATCTCAT CGCGATCATC
TTTCTGCGCG AGGTCGGGCT TCTTCTCACC GCGATCATCG TGGCGGGCCG CTCCGGCAGC
GCCTTCACCG CCGAGATCGG CTCGATGAAG ATGCGCGAGG AAATCGACGC CATGCGCACC
CTCGGCCTCG ATCCGATGGA GATGCTGGTG CTGCCGCGCG TGCTCGCGCT CATGGTCACG
CTGCCGCTTC TCACCTTCGT CGCCGACATC ATGGGGCTGA TCGGTGGCGG TCTCGTCGTC
CAGGTCATGC TGGACATGCC CCCCGGCGTC TATATCAGCC GCGTGCAGGA GGCGGTCGGC
TTCTGGACCT TCGGTGTCGG TCTCGTGAAG GCCCCCTTCA TGGCCGTCGT CATCGCGCTT
GTCGGCTGCC GCTCGGGCCT TTCCGTTACC GGCAGCGCGG AATCGGTCGG CGCCATGACC
ACGCGTTCGG TCGTCCGGTC GATCTTCCTC GTCATCATTC TCGATGCGCT CTTCGCAATG
TTCTTCACGG CGGTGGGCAT ATGA
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| Protein sequence | MAEANNPREM AGAPASCHIE ADGNVLRIEA AGDWSIVHLD PVDRQLRAIG ARPGTGRAII
GFKDITRFDT AAAAILGRTA AHLGEQGIKV DFEDVSDAQR LLLDKIDSCG MPEPAHVPWR
PLHIQIIDKI GATMRDIGAE GLAMLGFVGA VMATAGRTIA RPSRLRWTPF VHHMEKAGFD
ALPLVCLLTF LIGAVVAQQG AVQLRQFGAE VFTVNLIAII FLREVGLLLT AIIVAGRSGS
AFTAEIGSMK MREEIDAMRT LGLDPMEMLV LPRVLALMVT LPLLTFVADI MGLIGGGLVV
QVMLDMPPGV YISRVQEAVG FWTFGVGLVK APFMAVVIAL VGCRSGLSVT GSAESVGAMT
TRSVVRSIFL VIILDALFAM FFTAVGI
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