Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2503 |
Symbol | |
ID | 5455558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2704170 |
End bp | 2705363 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878080 |
Product | major facilitator transporter |
Protein accession | YP_001413769 |
Protein GI | 154252945 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00527244 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCTCG CCATCCGCCT TGCGACCGTC TACGGCACGA TGTTCCTGTT CACGGGCGTC TATCTGCCGT TCTTTCCGGT ATGGCTGAAG TCCGAGGGCC TCGCACCGAC CGAGATTTCG CTGGTCGTCG CGCTGTCCCT GTTCCTGCGC ATCGTCGTCA GTCCCTTCTT CGCCGCCGTC GCGGACAGGC TGGGCGACCG CCGCCGCGTC ATTCTGTGGC TCGCATGGGT GTCGCTCGCC GTCGGCGCGC TCTTTCTGCT GGTGGAGGGC TTCGGGCCCA TCCTTCTCGT CTCGCTGGTG CTGAACGCGG TCTTTCCGTC CATCGGCCCC CTGGTCGAAA CGATCTCCAT GCGCGCCCGT ATCGATCACG GCATGAACTA CGGCCGCGTC CGTCTATGGG GCTCCATCAC CTTCGTGGGC GCGAGCGTTG GCGCGGGCTG GCTTCTCGAA TGGAACCCGC CTTCCATCAT CGCCGTCTGC CTCGTCGCGG CGCTTGCCTT CAACATTGCC GGTCTCTGGC TCCTGCCGCG CGAGGTCGGG CGTCTGCGCA AGCCCGTGCC GAGCGGCCGC CAGTTCGCGG ATGTGCTGCA GATCGGCCGC CACCCGGTCT TCATCCTGTT CGTGCTGACG GCGAGCCTCA CCCAGGCGAC CCATGCCGTC TATTACGCCT TCGGCTCGCT CGCCTGGCAG CTTCAGGGTT ATTCGGACAG CGTGATCGGC CTTCTTTGGG CGACGGGCGT TCTCGCCGAG ATCGTCCTTT TCTACATTTC CGGGCCGTTG ATGGCGCGTT TCGGGGCGGT CCGCCTGCTC ATGCTGGCCG CCGCCGCCGC CATTCTCCGC TGGACCGTCA CGGCCTTGAG CCCGCCTCTC GCCCTGCTTT TCGTCATGCA GGCGCTGCAT GGCCTCACCT TCGGCGCGGC ACATCTCGGC GCGGTGCAGT TCGTCGCGCA GGCGGCGCCG CCAAGGCTTG CGGCCACGGC CCAGAGCCTA TACGCAGCCA TGGCGTCCGG CGTTATGATG GGCCTTGTGA CCATCGGCAT GGGGCCCATC TATGAAAGGC TTGGGCCTTA TGCCTATTTC GTGATGGCGG GCGCGGGGGC GGTGGCCCTC GCCGGTGCCG TTCTTGTCGC GATGTGCTGG AACGGCGACG TGCTCGTGCC GGAAGAAGAA CAGGAAGAAG AAAATGGCAA TTGA
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Protein sequence | MSLAIRLATV YGTMFLFTGV YLPFFPVWLK SEGLAPTEIS LVVALSLFLR IVVSPFFAAV ADRLGDRRRV ILWLAWVSLA VGALFLLVEG FGPILLVSLV LNAVFPSIGP LVETISMRAR IDHGMNYGRV RLWGSITFVG ASVGAGWLLE WNPPSIIAVC LVAALAFNIA GLWLLPREVG RLRKPVPSGR QFADVLQIGR HPVFILFVLT ASLTQATHAV YYAFGSLAWQ LQGYSDSVIG LLWATGVLAE IVLFYISGPL MARFGAVRLL MLAAAAAILR WTVTALSPPL ALLFVMQALH GLTFGAAHLG AVQFVAQAAP PRLAATAQSL YAAMASGVMM GLVTIGMGPI YERLGPYAYF VMAGAGAVAL AGAVLVAMCW NGDVLVPEEE QEEENGN
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