Gene Plav_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2499 
Symbol 
ID5453845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2700927 
End bp2701313 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID640878076 
Producthypothetical protein 
Protein accessionYP_001413765 
Protein GI154252941 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.300029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.000130725 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGGATGT GGCTTACTAT CGGTGCGCTG AGCGGGCTCA TCTCGGTCGC ACTCGGCGCT 
TTCGCCGCGC ATGGATTGCA GAACCGCGTC GGGCCGACAG AGCTTGCCGC CTTTGAAACA
GGCGCGCGCT ACCAGATGTA TCACGCGCTG GCACTCATCG CCGTTGCCTG GGCATCGACG
CAGGCAGGCG GCGGCTTCTC ATCGCTCTCA GTTTCGATTG CCGGCTGGGC GTTCCTTATC
GGCTCGGTGC TTTTTTCCGG CTCGCTCTAC TATCTCGGCA TCACCGGCAG CCGCTCGCTG
GTGCTGGTGA CACCTGTGGG CGGGGTCGCC TTCCTTGCCG GCTGGGTGGC GCTGGCGCTG
GCCGGCTGGG CAATGAAAGC CCCCTGA
 
Protein sequence
MRMWLTIGAL SGLISVALGA FAAHGLQNRV GPTELAAFET GARYQMYHAL ALIAVAWAST 
QAGGGFSSLS VSIAGWAFLI GSVLFSGSLY YLGITGSRSL VLVTPVGGVA FLAGWVALAL
AGWAMKAP