Gene Plav_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2490 
Symbol 
ID5454370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2692145 
End bp2692759 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID640878067 
Producthypothetical protein 
Protein accessionYP_001413756 
Protein GI154252932 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.144778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0598589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTTC CCATCGATAT CGAGACGGTC AAGGGCTTCA TGGATGCGGC GGAGGGTAGG 
GCGCTCCACG AGGCGGCGCT GGATGCGTCC CGCCATGGCC CGGTGCTGGA AATCGGCTCC
TATTGCGGCA AGTCCACCGT CTATATAGGC ACCGCCTGCC AGCTTAATGG CGCGGTGCTC
TACGCGCTCG ACCATCATTA CGGGTCCGAG GAAAACCAGA AGGGCTGGGA GCATCACGAC
GAAGCCCTCT ACGACGCCGA GACGGACCGC CTCAACACCT TCCCGCTCTT CCGCCGGACC
ATGCGCATGG CGAAGCTCGA AGACACGGTA GTGCCGCTCG TTGCGCCGTC GGAAGTCGTC
TCGAAGGGCT GGGCGACGCC GCTGGCGATG GTCTTCATCG ATGGTGGCCA CGGCATGGAA
CCCGCGCTCA CCGACTACCG CCACTGGGCG CCGCGCGTCA TGCCGGGCGG CATCCTCGCG
ATTCACGACG TCTTTCCCGA CCCGAAGGAC GGCGGCCGCC CGCCATACGA GATCTACAAG
ATGGCGCTGG CGTCTCAGCT TTTCGCGGAG GAGAAGGCCG TGAAGAGCCT GAGGCTACTC
CGCCGCCTCG GCTAG
 
Protein sequence
MQLPIDIETV KGFMDAAEGR ALHEAALDAS RHGPVLEIGS YCGKSTVYIG TACQLNGAVL 
YALDHHYGSE ENQKGWEHHD EALYDAETDR LNTFPLFRRT MRMAKLEDTV VPLVAPSEVV
SKGWATPLAM VFIDGGHGME PALTDYRHWA PRVMPGGILA IHDVFPDPKD GGRPPYEIYK
MALASQLFAE EKAVKSLRLL RRLG