| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2461 |
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| Symbol | |
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| ID | 5455789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2663283 |
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| End bp | 2664746 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878037 |
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| Product | protease Do |
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| Protein accession | YP_001413727 |
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| Protein GI | 154252903 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.282198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTA CGACCGGTGA GAGACTGACA AGGCGTTTCC TCTCGGGAAT AGCCGGAGTG
TTTCTCTCGG CCGTGCTCAT TTCCCTGCCG CCGCTGCCGG CCTTCGCGCA GGGCGCGCCG
AACAGTTTCG CCGATCTGGC GGAGCGCCTG TCGCCCGCCG TCGTCAATAT CTCCACCTCT
CAGGTCCTCT CTCCCGGCGA CATGGCCATT CCGAGTATTC CGCCGGAATC GCCGCTCAAC
GATTTTTTCG AGGAGTTTCT GGAACAGCAG GAAAGCATGC GTCCGCAGCG CGTCCAGTCG
CTCGGCTCCG GCTTCGTCAT CGACCCGGAC GGCATCGTCA TTACGAATAA TCATGTGATC
GAAGGCGCCG ACAGGATCGA AGTGACGTTC ACGGACGGAA CCACGCTGCC GGCGACCGTC
GCCGGAACCG ATCCGAAAAC CGATATCGCG GTGTTACGGG TCGAAAGCAG CAAGAAGCTT
CCCTTTGTCG AGCTTGGCGA CAGCAACAAG GCGCGCGTCG GCGATTGGGT GATTGCGATC
GGCAATCCCT TCGGTCTCGG CGGCTCGGTC ACGGCGGGCA TCGTCTCCGC ATTGAACCGC
GACATTCACG CCGGCAATTA CGATGATTTC ATCCAGACGG ACGCGGCCAT CAATCGCGGT
AATTCGGGCG GCCCGCTCTT CGACATGGAA GGCCGCGTGG TCGGTGTCAA TTCGGCGATC
ATTTCCCCTT CTGGTGCATC CGTCGGCATA GGTTTCGCGG TGCCGACAAG CACGGTGAAA
CCGGTCGTCG CGCAAATCCT GAAGTTCGGC GAAACGCGGC GCGGCTGGAT CGGCGTGCGT
ATACAATCTG TCACGCCGGA AATTGCGGAA AGCCTCGGCC TTGGCCCTAG CCGCGGTGCG
CTCATCGCGG GCGTGAGCCC CGGCGGCCCC GCGGAGGAAG CCGGTATCGA AACAGGAGAC
GTCGTCCTCG CCTTCGACGA CAAGATCATA ACCGCCATGC GGGATTTGCC GCGCGTGGTC
GCCGAAGCCG AGATCGGCAG CACCGTGAAT GTGCAGCTTT TTCGCGGCGG CGACACGCTG
ACACGGAAGA TCGTGGTGGG GCGGCTTGAA GATGAGGAAG CACAACCTGT CGAAGTGCCG
GGGGCGGCCG GGTCGACGCC CGACAAGACG GTTGTGCTCG GTCTTGTGCT CGGCGAATTG
AACGATGACC TGCGCGAGCG TTTCGGCGTG CCCGAGGGCG TGCCGGGTGT CCTCATCACC
GATGTCGATC CCTTGAGCGC GGCTGCGGAG AAGGGCATTC GTCCCGGCGA GGTCATCGTG
GAGGTGGCGC AGCGGTCCGT CTCATCGCCG GCGGAAGTCG AGGAGATCGT ATTGTCCGAA
GAGAAGGCCG GGCGCAACAC GGTGCTGTTG CGCCTTTCGC TCGGCGGCGA AATCCGTTTT
GTCGCCTTGC GTCTCGGCTC CTAG
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| Protein sequence | MTLTTGERLT RRFLSGIAGV FLSAVLISLP PLPAFAQGAP NSFADLAERL SPAVVNISTS
QVLSPGDMAI PSIPPESPLN DFFEEFLEQQ ESMRPQRVQS LGSGFVIDPD GIVITNNHVI
EGADRIEVTF TDGTTLPATV AGTDPKTDIA VLRVESSKKL PFVELGDSNK ARVGDWVIAI
GNPFGLGGSV TAGIVSALNR DIHAGNYDDF IQTDAAINRG NSGGPLFDME GRVVGVNSAI
ISPSGASVGI GFAVPTSTVK PVVAQILKFG ETRRGWIGVR IQSVTPEIAE SLGLGPSRGA
LIAGVSPGGP AEEAGIETGD VVLAFDDKII TAMRDLPRVV AEAEIGSTVN VQLFRGGDTL
TRKIVVGRLE DEEAQPVEVP GAAGSTPDKT VVLGLVLGEL NDDLRERFGV PEGVPGVLIT
DVDPLSAAAE KGIRPGEVIV EVAQRSVSSP AEVEEIVLSE EKAGRNTVLL RLSLGGEIRF
VALRLGS
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