| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2439 |
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| Symbol | |
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| ID | 5456071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2640412 |
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| End bp | 2641806 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878015 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001413705 |
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| Protein GI | 154252881 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.268315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGG CAGCGGCGAG GGACGAGGGA AGGGTGGCGG CGCTTGGTGA ATTGCAGGCG
CTTCTCGGCG ACCGGCTGAC GACAGCGGCT GCGATGCGCG AGGCTCATGG CCGCGACGAG
AGCTGGCATG CCGTCGCGAT GCCCGATGCC GTCGCCTTCG CGCGGACGAC GGAGGAGGTC
GCCGCCATCA TCCGCATCTG TTCCGCTTAC GACATGCCCG TCATCCCCTT CGGCGCGGGC
ACCTCGCTTG AAGGCCATGT CTCCGCGGTG CATGGCGGCC TGTCGCTCGA TCTCTCGCAG
ATGAATGCCA TTCTCGAGGT GAACGCGGCC GATCTCGATG TGCGGGTCGA GGCGGGCGTC
ACGCGCAAGC AGCTCAACGA CTATCTGCGC GACACCGGAT TGTTCTTTCC CATCGACCCC
GGCGCCAATG CCACCATCGG GGGCATGGTC GCGACGCGCG CGTCCGGTAC CAATGCAGTC
CGCTACGGCA CCATGCGCGA AAACGTGCTG AACCTCACTG CCGTCATGGC GGACGGCTCG
GTGGTGCGGA CCGCGCGGCG GGCCCGCAAG TCTTCCGCCG GCTATGACCT CACGCGGTTG
CTGATCGGCT CCGAAGGCAC ACTCGGCATC GTCACCGAGG TGACGCTCCG GCTCTATGGC
ATACCGGAAG CTATCCGTTC GGGCGTCGTC CCCTTCGCCA GCATCGAAGG CGCGGTCGAT
GCCGTCATCG AGACCATCCA GTCGGGTTTG CCCGTCGCCC GCATCGAAAT TCTCGATCCC
CTGTCGATCC GCGCCTGCAA CGCCTATTCC AAACTGACGC TCGCCGAAGT GCCGACCTTG
TTTGTCGAGT TTCACGGCAC GGATGCCTCC GTCGCGGAAC AGGCGGAACG CTTCGGCGCC
ATCGCTTCGG AGCATGGCGG CGGCGCGTCC GAATGGGCGA CGAAAGCCGA AGACCGCACG
AAGCTCTGGG AAGCGCGCCA CAACGCCTAT TACGCCGCGC TCGCCTATGC GCCCGGCAAG
AAGGGCATGG TCACCGATGT CTGCGTGCCG ATCTCGCGCC TCGCGGAAGC GATAAGGGGC
ACGCTGGCCG ATCTCGAAAC CTCGTTCCTG AAAGCACCCA TCGTCGGCCA TGTCGGCGAC
GGTAATTTCC ACATGCTGCT GCTGATGGAC CCCGCAAACC CGCAGGACCT CGCGGAAGCC
ACCCGCCTCC ACGACCGCAT GGTCGCCCGC GCCCTCTCCC TCGACGGCAC CTGTACCGGC
GAACACGGCA TCGGCGAGGG CAAGATCAAG TTCCTCGAAG CGGAGCACGG AACCGGCGTC
GCCGTCATGC GCGCCATCAA ACAGGCGCTC GACCCGAAGG GGATTTTGAA CCCGGGGAAG
ATATTTTCTG CCTGA
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| Protein sequence | MSRAAARDEG RVAALGELQA LLGDRLTTAA AMREAHGRDE SWHAVAMPDA VAFARTTEEV
AAIIRICSAY DMPVIPFGAG TSLEGHVSAV HGGLSLDLSQ MNAILEVNAA DLDVRVEAGV
TRKQLNDYLR DTGLFFPIDP GANATIGGMV ATRASGTNAV RYGTMRENVL NLTAVMADGS
VVRTARRARK SSAGYDLTRL LIGSEGTLGI VTEVTLRLYG IPEAIRSGVV PFASIEGAVD
AVIETIQSGL PVARIEILDP LSIRACNAYS KLTLAEVPTL FVEFHGTDAS VAEQAERFGA
IASEHGGGAS EWATKAEDRT KLWEARHNAY YAALAYAPGK KGMVTDVCVP ISRLAEAIRG
TLADLETSFL KAPIVGHVGD GNFHMLLLMD PANPQDLAEA TRLHDRMVAR ALSLDGTCTG
EHGIGEGKIK FLEAEHGTGV AVMRAIKQAL DPKGILNPGK IFSA
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