Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2408 |
Symbol | |
ID | 5454746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2599261 |
End bp | 2599971 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877983 |
Product | heat shock protein DnaJ domain-containing protein |
Protein accession | YP_001413674 |
Protein GI | 154252850 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.553614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATTT GGGGAAAAAT CGCGGGCGCC GGCGTTGGCT TAGCCGTCGG TGGGCCCTTG GGTGCGCTTC TGGGAGCGGT CGCCGGGCAT ATCGTCGTCG ACCGCGCACT CCAGGACAGC GAGGTCGTGT TCACGATCGC CCTTATCGCG CTTTCGGCGA AGATGGCGAA AGCCGACGGC GAAGTCAGCG ATGCCGAGAT CAGGGCCTTT GAAGAGATCT TCCAGGTGCC GCCCGGCGAG GCGAAGAATG TCTCGCGGGT CTACAAGGTG GCGCAGCAGG ATGTTGCCGG CTTCGAGGCC TATGCGCGGC AGGTGGCCCG TATCTATCAG GACCGGCCCG CCGTCCTCGA AGACGTGATT GACGCGCTCT TTCATATTGC GAAGGCGGAT GGTCATGTTC ACGTGCAGGA GCTCGAATAT CTGCGCATCG TCGCGGATAT TTTCGGCTTC TCCGAAATCG AGTTCGCCCG TATCCGCGCC AGCCATCTCG GCCACGAGAA AGGCGATCCC TATCTCGTGC TCGGCATCAC GCCCGGTATT TCCGATGAAG ACCTCAAGAA AGCCTATCGC CGGCTGGTCC GGGAGAACCA TCCGGATACG TTGATCGCGC GCGGCGTGCC GAAGGAGCTT GTGACCATCG CCAACGAGAA GCTGGCGGCG ATCAATGTCG CCTATGGAAA GATCGTGGCT CAACGCGGCA TCGCCGCCTA G
|
Protein sequence | MSIWGKIAGA GVGLAVGGPL GALLGAVAGH IVVDRALQDS EVVFTIALIA LSAKMAKADG EVSDAEIRAF EEIFQVPPGE AKNVSRVYKV AQQDVAGFEA YARQVARIYQ DRPAVLEDVI DALFHIAKAD GHVHVQELEY LRIVADIFGF SEIEFARIRA SHLGHEKGDP YLVLGITPGI SDEDLKKAYR RLVRENHPDT LIARGVPKEL VTIANEKLAA INVAYGKIVA QRGIAA
|
| |