| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2346 |
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| Symbol | |
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| ID | 5453411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2529248 |
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| End bp | 2530426 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877924 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_001413615 |
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| Protein GI | 154252791 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.104931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0105772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGGC TGTTCGCCAA GCTCCCAATT TCCGAGATTG CTTCCGTTGA GCGAGGTAAG
TTCTCTGCGC GTCCGCGCAA CGACCCCCGA TATTTCGGCG GTGACATTCC CTTTCTGCAA
ACAGGTGACA TTGCTCGCGC CGGACGCTTC ATCGTCGGTT GGGACCAGAC ACTGAACGCA
CAAGGGCTTG CGGTCAGCCG GCTCTTCCCT CGAGGAACGA TATTCATGTC AATCGCAGCC
AACGTCGGTG ACGTGGCTAT TTCTACATTC GATGCCGCGT GCCCTGACAG TGTTGTTGCA
GTCATCCCCA GGAATGGGGC TGATGCAGAA TGGCTCTTTC AAATCCTAAG GCACTGCAAG
GACGGACTAT CCTCTTTGGC AACGCAAAAC GCGCAGGCCA ATCTCAGCCT TGAGAAGATT
ACTCCATTCA GGGTTCCAGT TCCCCCACTC CCCGAACAAT GCAAGATCGC CGAAATCCTG
CGGACATGGG ACGAGGCCAT CGAGAAGCTG GAGGCGCTGC GGGCGGCGAA GCGTGACCGC
CTGACAGGAC TGACGCAAAA GCTGCTCGGC ATTGGCGGAG CTTTCCCCGA CAGGTGGAAG
CAGCGCCCAC TTTCGGCCAT CTCGACCCGT GTGCGTCGCC AGAACGGCGG CGGCGATCAT
CCGGTCATGA CCATTTCGGC AAAGTCCGGT TTTCGTCTGC AATCCGAAAA ATTCAGCCGT
GATATGGCTG GCAGCAGCGT TGATCGCTAC ATCGTTCTGC ATGAGGGCGA ATTTGCTTAC
AACAAGGGCA ACTCTCTCAC GGCGCCTTAT GGCTGCATTT TCCCCTTGGA TCGTCCGACT
GCGCTGGTGC CGTTCGTCTA TTTCTGCTTT GCGCTCAAGG CGGACCTGAG CCGCGAGTTC
TTCGCCCACC TGTTTGCGGC CGGTGCTCTG AACCACCAAC TGTCGCGCCT GATCAATTCC
GGCGTCCGGA ACGATGGCCT CCTGAACCTG AACCCGGAGG ATTTCTTCGG CTGCAAGGTG
CCGGTTCCCC CTGCCGACGA ACAATCGGCC ATCGCATCGA CCCTGACGAC CGCAAAGCAA
GAGATCGGTC TACTGGAGAC CGAAATCGAA ACCCTCACCC GCCAGAAACG CGGCCTGATG
CAGAAGCTGC TGACGGGCGA ATGGCGCGTC GCTGTCTGA
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| Protein sequence | MNRLFAKLPI SEIASVERGK FSARPRNDPR YFGGDIPFLQ TGDIARAGRF IVGWDQTLNA
QGLAVSRLFP RGTIFMSIAA NVGDVAISTF DAACPDSVVA VIPRNGADAE WLFQILRHCK
DGLSSLATQN AQANLSLEKI TPFRVPVPPL PEQCKIAEIL RTWDEAIEKL EALRAAKRDR
LTGLTQKLLG IGGAFPDRWK QRPLSAISTR VRRQNGGGDH PVMTISAKSG FRLQSEKFSR
DMAGSSVDRY IVLHEGEFAY NKGNSLTAPY GCIFPLDRPT ALVPFVYFCF ALKADLSREF
FAHLFAAGAL NHQLSRLINS GVRNDGLLNL NPEDFFGCKV PVPPADEQSA IASTLTTAKQ
EIGLLETEIE TLTRQKRGLM QKLLTGEWRV AV
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