| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2316 |
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| Symbol | |
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| ID | 5455510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2486138 |
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| End bp | 2488039 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877895 |
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| Product | DNA primase |
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| Protein accession | YP_001413587 |
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| Protein GI | 154252763 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.102416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0205007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCC CCAAGGCCTT TCTTGACGAG TTGAAGGGGC GCATTCGCGT CTCGGAGGTC
GTTGGGCGCA AGGTGAAGCT CATAAGGCGG GGCAGGGAGT TCGTGGGCCT GTCGCCTTTC
TCCAACGAGA AGAGCCCAAG CTTCACCGTC AATGACGACA AGCAATTCTT CCATTGCTTC
TCGTCGGGCG AACATGGCGA CGTCATCAAG TTCCTCGAAA AGACCGAGAA CCTCTCCTTC
ATCGAGGCGG TGGAGCGGCT CGCCGCCGAG GCCGGCATGG AAATGCCGAA GCGAGACTCC
TTCGTCGCCG AGCGCGAGAA GGAGGCGGCC ACCCTTATCG ACGTGATGGA AATGGCGGCG
CAGTTCTTCC GGCAGAAATT GCAGGAGGGC GCAGGTGCGG AAGCGCGGGC CTATCTCGAC
CGGCGCGGCA TGAAAGCGAA AACGCTGGAC GATTTCGGCG TCGGCTATGC GCCGGGAGAC
GAGCGGGCCG ACCGCACCGC GCTGATGCGC TACCTCAAGT CGCGCGACGT GACGCAAGAG
CAGATGGCGG AAGCGGGTCT CATCATCTCC GGCCCTGACA TCCGCGAGCC ACATGACCGT
TTCCGCAACC GCGTGATGTT TCCGATTGCG GATGCCCGTG GCCGCGTCAT CGCCTTTGGC
GGCCGCGCGC TTGCTTCGGA CGCGAAGGCC AAATATCTGA ACTCGCCGGA CACGCCGCTC
TTCCACAAGG GCCGTGTTCT CTACAACCTC AACCGCGCCC GCAAGCCCGC CTATGACGAA
GGCACGGTGA TCGCCGTCGA AGGCTATATG GATGTGATCG GGCTTTCGCA GGGCGGCATC
GACAATGCGG TCGCGCCGCT TGGCACCGCG CTCACCGAAG ACCAGATCGC GCTTCTCTGG
CGGATGGCGC CGGAGCCCAT CCTCTGTTTC GATGGCGATA AAGCGGGGCT CCGCGCCGCC
TACCGGGCGG TCGAGCGCGT GCTTCCGCTG CTGAAGCCCG GCCATTCGCT CCGCTTCGCG
CTGCTGCCGG AAGGGAAAGA CCCGGACGAT CTCGTGCGCG AGGAAGGCGG GCAGGCGATG
CGCGACATCC TGGCGAAGGC GCGCCCGCTC GCGGAGATGG TCTGGGAGAA GGAAATCTCC
GCCGGCCAAT GGGACACGCC GGAGCGCCGC GCCAAGCTCG AAGCCGATCT CGAGGCGGCG
GTGGCCACCA TTTCGGACCC GAAAGTGCGC GGCCACTACA GCGACAATCT CAGGGCCAAG
GTCCAGCAGT TCTTCGGCGG CAGCGCGCGG GGCGGCCAGC GGGCGGGGCT CGGCCAGAAC
CGTTTCCCGC GCGGCCAGTT CGGCCGGCCC TTCAAGAAAG GCACCTTTAA CCGGGACCGG
GACTACATTC CTCCGATCAC GCCCGAATTG CGCCGTTCGG CGCTCGCAAG CGGCGGCGGG
GGCGAGCGCA GCCGGGAGGC GTTGCTGCTG CTGACCCTCC TTAACCACCC GGAACTCTTG
GAGAATTACG CCGAAGAGGT CTCCCGGGTC GAGATCGGCA CCCCGGCGCT TGACAGATTA
CGCAATGAAA TCATAGATAT AGCCGCCCTC CATGCGCCCC TTGAAAGAGA AGCGCTGAGG
AACCACTTGC TGAGCAGGGA TTTGGCGGAA ATTGCGCGGC GGCTGGAGGC CGGTTCGGCC
TTCAAAAGCG ACCGGTTTGC CTGGCCCGAT GCGGCGCCGG ATGAGGCGGA GGCAGGTTTT
CTGCACACGC TGGCGCGGCA TCGCCGGGCA ATCGTCCTGC AAGCTGAATT GAAGGCCGCC
GAGCGCGCGC TGGCGGAAGA GATGACGGAA GAGAATTTCG CCCGCCTGCA AGCCATCCAT
GCGCAACTCG AGCGCTCGGA AGTGGCGGAC GGGTTGGGCT AG
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| Protein sequence | MSFPKAFLDE LKGRIRVSEV VGRKVKLIRR GREFVGLSPF SNEKSPSFTV NDDKQFFHCF
SSGEHGDVIK FLEKTENLSF IEAVERLAAE AGMEMPKRDS FVAEREKEAA TLIDVMEMAA
QFFRQKLQEG AGAEARAYLD RRGMKAKTLD DFGVGYAPGD ERADRTALMR YLKSRDVTQE
QMAEAGLIIS GPDIREPHDR FRNRVMFPIA DARGRVIAFG GRALASDAKA KYLNSPDTPL
FHKGRVLYNL NRARKPAYDE GTVIAVEGYM DVIGLSQGGI DNAVAPLGTA LTEDQIALLW
RMAPEPILCF DGDKAGLRAA YRAVERVLPL LKPGHSLRFA LLPEGKDPDD LVREEGGQAM
RDILAKARPL AEMVWEKEIS AGQWDTPERR AKLEADLEAA VATISDPKVR GHYSDNLRAK
VQQFFGGSAR GGQRAGLGQN RFPRGQFGRP FKKGTFNRDR DYIPPITPEL RRSALASGGG
GERSREALLL LTLLNHPELL ENYAEEVSRV EIGTPALDRL RNEIIDIAAL HAPLEREALR
NHLLSRDLAE IARRLEAGSA FKSDRFAWPD AAPDEAEAGF LHTLARHRRA IVLQAELKAA
ERALAEEMTE ENFARLQAIH AQLERSEVAD GLG
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