| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2294 |
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| Symbol | |
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| ID | 5453672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2461067 |
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| End bp | 2461666 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877873 |
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| Product | sortase family protein |
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| Protein accession | YP_001413565 |
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| Protein GI | 154252741 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTG GTCAAAAAAA GAAAGCGGTG GCCCTCGCCT GGGCCACCGC CATTCTTCTT
TGCCTCGGCT TCGGCACATG GCAACTCGGC CACGGGCTCT ACATCAATGC AAAGGCCCAA
TTGGCACAGG TACTTCTCGA GCGCGCATGG CAGATGACGC TGGCGGATGG CAAGCCGCAC
AAGGCCTGGC CCTGGGCCGA TACATGGCCC GTCGCAAAGC TCGAAATTCC CTCGCTGGGT
CTCACCCAAA TCGTTCTTTC GAATGCCAGT GGCGAAGCCC TGGCCTTCGG TCCGGGCCAT
CTCGTCGGAT CGCCGCAACC TGGACGCGGG GGAATGACCG TTATCGCGGG ACATCGCGAT
ACGCATTTTT CGTTCTTGAG CGGACTAAAA AATGACGACC ACGTCATTGT TTCGACGGCG
GATGGTGTGA GCCATCGATA CATCGTCGGA CAAAGCGAAA TTCTGGACTC CGGTCTCGTG
CGCATCGACC CCTTCTCGCG GCCGGGTATC GCCTTCGTCA CCTGCTATCC CTTCGACAGC
AAGGAGCAAG GTCCGTTGCG CTACGTGGTT TTTGCCTCGC CGGCCCCTGA CGCCGGCTGA
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| Protein sequence | MTIGQKKKAV ALAWATAILL CLGFGTWQLG HGLYINAKAQ LAQVLLERAW QMTLADGKPH
KAWPWADTWP VAKLEIPSLG LTQIVLSNAS GEALAFGPGH LVGSPQPGRG GMTVIAGHRD
THFSFLSGLK NDDHVIVSTA DGVSHRYIVG QSEILDSGLV RIDPFSRPGI AFVTCYPFDS
KEQGPLRYVV FASPAPDAG
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