| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2281 |
|---|
| Symbol | |
|---|
| ID | 5455891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2449586 |
|---|
| End bp | 2449939 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640877860 |
|---|
| Product | protein of unknown function DUF861 cupin_3 |
|---|
| Protein accession | YP_001413552 |
|---|
| Protein GI | 154252728 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.309355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCG CGCTGATCCC CTTCGCCATT GCCGGCCTCG CGCCCGAGAA AGGCGCCCCC
GCCCCTGACA GGATCGTCTC CGGCACGCCC GAAAGCCGCA CCTGGAACCT CTATGCCTCG
CCCGATGGCA AGTTCTTCTC CGGCATCTGG GAAAGCGAGC CCGGCGCCTG GCGCATCCAC
TACACCGAGC ATGAGTTCTG CCACATCCTC GAAGGCGAAA GCCGCATCGC CGAGGACGGC
GGAAAAACCG TGACGCTGAA GGCGGGAGAT GCCTTCGTCA TCCCGGCCGG CTTTACCGGC
ACCTGGGAAG TCGTCACGCG AACGCGCAAG CAATACGCGA TCTACGAAGC CTGA
|
|---|
| Protein sequence | MTTALIPFAI AGLAPEKGAP APDRIVSGTP ESRTWNLYAS PDGKFFSGIW ESEPGAWRIH
YTEHEFCHIL EGESRIAEDG GKTVTLKAGD AFVIPAGFTG TWEVVTRTRK QYAIYEA
|
|---|
| |