| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2265 |
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| Symbol | |
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| ID | 5456177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2435162 |
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| End bp | 2436043 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877844 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001413536 |
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| Protein GI | 154252712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.739581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAA GTTTCACACG CGGACATTTT GGCGGTTTCA GAGCGGCGGT TTCAGACATG
ACACTTTCAT TCAAGCGCCC ACTCGTTCTT GTGGGGGCGG GCAAGATGGG CAGTGCCCTG
CTGAACGGTT GGCTGGCTGA AGGTCTTTCA CCTTCCCTCG TCAGCGTGCG CGATCCAGCG
GCTTCGCCGG AAATCACTGG CCTGGCCGCC AAGGGGCTGT CTCTCAATCC TTCGGTTCAT
GACATCGCCC TCACACGCCC CGCGGTCGTG CTGCTTGCGG TGAAGCCGCA AGCGATGCCT
GAAGTGCTGC CGGAACTCGC ACTGCTTGTG CAACCGGAGA CGCTGTTTCT CTCGATCGCG
GCCGGTCTCG GCCTGCATCG TCTGAAGGAG TTGCTGGGTG CGGATGCGCA TGCCGTCCGG
GCAATGCCGA ACACGCCTGC CTCTGTCGGC AGGGGCATTA CAATTGCCTG CGCAAACGAG
CTGGTCACTT CCGAGCAAAG GGCCCTGACG GACAGTCTCC TTGCGGCGGT GGGCGATGTC
GGCTGGGTGG AAAACGAGGC GCAGATCGAT GCCGTGACGG CAATCTCAGG CAGCGGTCCG
GCTTATGTTT TTTATCTGGT GGAATGTCTC GCTGCGGCAG GCGAAAACCT TGGCCTCGAT
CCCGACCTCG CCATGAAGCT TGCGCGGCAG ACGGTGAGCG GTTCGGGCGA GATGCTGCAT
CGGCTGGAAG AGCCTGCGGC CGTGTTGCGG GCCAATGTCA CGTCTCCCGG CGGGACGACG
GCGGCGGCGC TCGATGTGTT GATGGGCGAG GGTGGCCTGT CGCCGCTGAT GCGCCGCGCG
GCGCTTGCCG CGAGAGACAG GGCGCGGGCG CTGGGCAAAT AA
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| Protein sequence | MRVSFTRGHF GGFRAAVSDM TLSFKRPLVL VGAGKMGSAL LNGWLAEGLS PSLVSVRDPA
ASPEITGLAA KGLSLNPSVH DIALTRPAVV LLAVKPQAMP EVLPELALLV QPETLFLSIA
AGLGLHRLKE LLGADAHAVR AMPNTPASVG RGITIACANE LVTSEQRALT DSLLAAVGDV
GWVENEAQID AVTAISGSGP AYVFYLVECL AAAGENLGLD PDLAMKLARQ TVSGSGEMLH
RLEEPAAVLR ANVTSPGGTT AAALDVLMGE GGLSPLMRRA ALAARDRARA LGK
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