| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2257 |
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| Symbol | |
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| ID | 5455286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2428343 |
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| End bp | 2428993 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877836 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_001413528 |
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| Protein GI | 154252704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.251745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAGA CCCAGACGCT CAAGGCCGAG GCGCGCGAAA AAGGCAGCAA GGGGGCTGTC
CGTTCGCTCC GCCGCGCAGG CCGCGTCCCC GCCGTTATCT ATGGCGACAA GCAGTCGCCC
GAACTGATCG CCGTCAGCTA CAAGGACGTT TCCGCGCTCT ACCAGACCGG CACCTTCATG
AGCCATGTGC TCGATGTCGA GATCGGCGGC AAGACCGAGC GCGTCATTCC GCGCGACGTG
CAGTTCGAAC CTGTGCGCGA CTTCATCATC CATGTCGACT TCCTGCGCCT TGGCAAGAAC
GCGACGGTCA CCGTCGACGT GCCTGTGCAC TTCCACAATC ATGAAGCCTC GCCCGGCATC
AAGGCCGGCG GTGTGTTGAA CATCGTGCGC CATGAAGTCG AACTCGTCTG CCCGGCGGAC
GCGATCCCCG AGCAGCTCGA TATCGACCTC ACCGGCTTCG AGATGGGTTC CTCGATCCAC
ATCTCGGCCG TGAAGCTGCC CGCGAAGGTT TCGCCGACCA TCACCGACCG CGACTTCACC
ATCGCGACGA TCGCGGCCCC TGCCGCTGTC GTCTCGGCGG ACAATGAAGC CAAGACCGAG
GAAGCGGGCG AAGACAAGTC CGAGGAGAAG TCTTCCGGCA AGGAAGACTG A
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| Protein sequence | MAETQTLKAE AREKGSKGAV RSLRRAGRVP AVIYGDKQSP ELIAVSYKDV SALYQTGTFM
SHVLDVEIGG KTERVIPRDV QFEPVRDFII HVDFLRLGKN ATVTVDVPVH FHNHEASPGI
KAGGVLNIVR HEVELVCPAD AIPEQLDIDL TGFEMGSSIH ISAVKLPAKV SPTITDRDFT
IATIAAPAAV VSADNEAKTE EAGEDKSEEK SSGKED
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