| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2255 |
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| Symbol | |
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| ID | 5453349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2426586 |
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| End bp | 2427695 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877834 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_001413526 |
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| Protein GI | 154252702 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.416023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.725839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTCA AGTGCGGCAT CGTCGGTCTG CCCAATGTCG GCAAGTCCAC CCTCTTCAAC
GCGCTGACGC AGACGGCGAG CGCGCAGGCC GCGAACTATC CCTTCTGCAC CATCGAGCCG
AATGTCGGCG AAGTGGCGGT GCCGGATCCG CGGCTCGAAA AGCTGGCATC CGTTGCAAAG
AGCAAGGAAA TCATTCCGAC GCGCCTTACC TTCGTCGACA TCGCAGGCCT TGTAAAAGGC
GCATCGAAAG GCGAAGGGCT CGGCAACCAG TTCCTCGCCA CGATCCGCGA AGTGGACGCG
GTGGCCTATG TGCTGCGCTG CTTCGTCGAT GACGACATCA CGCATGTCGA GAACCGCATC
GACCCGCTTT CCGATGCCGA AATCGTCGAG ACGGAACTGA TGCTCGCCGA TCTCGACAGC
CTCGAAAAGC GCGTCGTCGC GAACGAGAAG AAGGCAAAGG GCGGCGACAA GGAAGCGAAG
CTGCAGGTAG AGATGATGAA TATCGCGCTC ACCTATCTGC GCGACGGCAA GCCCGCCCGC
CTTGCAACGG CGGAGAAGAA AATCTCCGAT GACGACATGA AGGCATGGGA AGGATTGAAC
CTCCTCACCT CGAAGCCGGT CCTCTATGTC TGCAACGTGG AGGAAGCCTC CGCCGCGACG
GGCAACGACT ATTCGAAGCG CGTGGAAGAA AAGGCGAAAG CGGAAGGCTC GCAATCCGTC
GTCATATCCG CCCGCATCGA GGAGGAAGTG GCGCAGCTTC CAGCCGAAGA CCGCACCGAA
TATCTGGAAA CACTGGGACT GACGGAGCCC GGCCTGTCGC GCCTCATCCG CGTCGGCTAT
GCGCTGCTCG ACCTCATCAC CTATTTCACG GTGGGACCGA AGGAGACGCG CGCATGGACG
ATTACGCGAG GCACGCGCGC GCCCGCGGCT GCCGGTGTCA TCCACACGGA CTTTGAAAAA
GGTTTCATCC GTGCCGAGAC GATTGCCTAT GACGACTATA TTGCGCTGAA TGGCGAACAA
GGGGCGAAGG ACGCAGGCAA GATGCGTCTC GAGGGCAAGG AATATGTGGT TCAGGACGGC
GATGTGATGC ATTTCCGCTT CGCGAACTAG
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTQTASAQA ANYPFCTIEP NVGEVAVPDP RLEKLASVAK
SKEIIPTRLT FVDIAGLVKG ASKGEGLGNQ FLATIREVDA VAYVLRCFVD DDITHVENRI
DPLSDAEIVE TELMLADLDS LEKRVVANEK KAKGGDKEAK LQVEMMNIAL TYLRDGKPAR
LATAEKKISD DDMKAWEGLN LLTSKPVLYV CNVEEASAAT GNDYSKRVEE KAKAEGSQSV
VISARIEEEV AQLPAEDRTE YLETLGLTEP GLSRLIRVGY ALLDLITYFT VGPKETRAWT
ITRGTRAPAA AGVIHTDFEK GFIRAETIAY DDYIALNGEQ GAKDAGKMRL EGKEYVVQDG
DVMHFRFAN
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