| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2254 |
|---|
| Symbol | |
|---|
| ID | 5456872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2425877 |
|---|
| End bp | 2426353 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640877833 |
|---|
| Product | dehydratase |
|---|
| Protein accession | YP_001413525 |
|---|
| Protein GI | 154252701 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.437437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.402982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCCA AGACTCCAAA ATATTTCTGG GAAGATTTCC CCGTCGGTGA AACCGTCGAA
TTCGGCGAGA AGCACGTAAC GAAGGAAGAG ATACTCGAAT TCGCCAGCGA GTTCGACCCG
CAGCCCTTCC ATCTCGACGA GGAAGCGGCG AAGCAGTCGA TCCTTGGCGG GCTCTGCGCA
AGCGGCTGGC ATTCCTGTGC GATGATGATG CGGATGATGT GTGACGGATA CATCCTCGAA
AGCGCCTCTA TGGGCGCGCC GGGCGTGGAC GAAGTGCGGT GGAAGAAGCC GGTCTATGTC
GACGATGTGC TCCGTGTACG GCGGACCTGC GTCGAGGCCC GTGCCTCGAA GAGCCGCCCG
GAGATGGGCC TCACGAAATT CCGCATCGAG ATGCTGAACC AGAAGGACGA GGTGGTGCTG
ACCTCGATCG GCTGGGCGAT GTATGGCCGC CGCCATCCGG CTGGGGAGGC AAACTGA
|
|---|
| Protein sequence | MQSKTPKYFW EDFPVGETVE FGEKHVTKEE ILEFASEFDP QPFHLDEEAA KQSILGGLCA
SGWHSCAMMM RMMCDGYILE SASMGAPGVD EVRWKKPVYV DDVLRVRRTC VEARASKSRP
EMGLTKFRIE MLNQKDEVVL TSIGWAMYGR RHPAGEAN
|
|---|
| |