Gene Plav_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2239 
Symbol 
ID5455363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2414306 
End bp2414851 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID640877818 
Producthypothetical protein 
Protein accessionYP_001413510 
Protein GI154252686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.60087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCCGCCCCCT TCTGCTGTTC GCCCTTGGCT TCATGCTCGC CGCTTGCGGC 
GAGGCGAAAC CGGAGGCGGA TGCGTTGCGG GCGGCGGCCG TCTTCTACGA CATCGTGTTG
AGCGCGCGCA GCAGCGGCGT GCCGGATGCG GATATGAGGG CGCGTCTCCG TCCCGTCATT
TCCTCCGATC TCGACAGCCT GCTCTCGCAG GCCGCTGAGG CCGAACGCCG CCATACCGAG
CGCGTGAACA ATTCCGAGCC GCCTTATCTG CAGGGCGACA TCTTCTCCTC GCTGTTCGAA
GGGGCGACGG CCTACGAAAT CGGCACCTGC GATGGCGACG AGCGACGCAT GCAATGCGAG
GCGATGCTGG CGCATGAGGC GGAAGAGCCG GTGCAGTGGA CGGACCGGCT GGTCCTCGTC
GCGAATGGCG GACCGGAAGA CCGGCGCTGG CTCGTCGACG ACATTCTCTA TGGCGGCGAT
TGGGACTTCG CCTCCAAAGG CACGCTCAAA TCCTCGCTCC GCGCGGTGAT CGCGGAGGAA
GAATAG
 
Protein sequence
MRTLRPLLLF ALGFMLAACG EAKPEADALR AAAVFYDIVL SARSSGVPDA DMRARLRPVI 
SSDLDSLLSQ AAEAERRHTE RVNNSEPPYL QGDIFSSLFE GATAYEIGTC DGDERRMQCE
AMLAHEAEEP VQWTDRLVLV ANGGPEDRRW LVDDILYGGD WDFASKGTLK SSLRAVIAEE
E