| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2227 |
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| Symbol | |
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| ID | 5455387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2400839 |
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| End bp | 2401822 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877806 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001413498 |
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| Protein GI | 154252674 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.82387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCC TGAAAACCAT CTGCGCCGCC CTTGCCGCAT CGCTCCTGTT TTTCGCCGCG
CCCGCCACGG CCGAACCGCT GAAAGTGGTG GCGAGCTTCA GCATTCTCGG CGACATCGCG
CGCGAGATCG GCGGCGACCG GACGGATGTG GCGGTGCTTG TCGGCCCCGA TGGCGATGCC
CATTCCTTCG AGCCGGGCCC CGCCGATGCA AGCGCGCTGG CGGATGCCGA TGTGCTGGTG
CTGAACGGCC TCGGCTTCGA GCCCTGGATG GTCCGCCTCG CCGCCGCCGC GCGCAGCAAG
GCGAAATATG TCACGGCAAG CTTCGGCGTC GGCCCACGCC GCCTCGGCGA AAACGCGCAT
AGTCACGGCC ATGATGATGA CCATGACCAC GACCACGACC ACGACCATGA CAAAAAGAAT
CACGACGAAG ACGGCTACCC GAAAACGGCC CGCGACTTCG ATCCCCATGC CTGGCAGAAC
CTCGCAAACG GCATGATCTA CGCGCAGAAC ATCGCGGATG GCTTCGCGGA AGCCGATCCC
GACAACGCGC TCTTCTACAA GGCGAATGCC GAGCGGTACA TCGCCGAGCT GAAGGAACTC
GACCGCTGGG TGAAATCGGA AATCGCCAAG GTGCCGGCGG AAAAGCGCAA GGTCATCGCC
ACGCATGACG CCTTCGGCTA TTTCGGCGAT GCCTATGGCG TCGAATTTCT CGCGCCTCTC
GGCGTCGGCA ATGAAGCGGA GCCGAGCGCG CAGGCGCTGG CGCGGCTGAT CGACCAGATC
CGCGCCGAAA ACATCAAGGC GCTCTTCATC GAGAACATGT CGGACCCGCG CATGATGGAA
ACCATCGCCC GCGAAACCGG CGCAGAAATG GGCGGCGAAC TCTATTCGGA CGCGCTCTCC
CCCGAAGGCG GCCCCGCCGC CACCTACATC GCCATGTTCC GCCACAACGT GCCTGTCCTC
GTCAGCACGA TGCAGAAGAA CTGA
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| Protein sequence | MTSLKTICAA LAASLLFFAA PATAEPLKVV ASFSILGDIA REIGGDRTDV AVLVGPDGDA
HSFEPGPADA SALADADVLV LNGLGFEPWM VRLAAAARSK AKYVTASFGV GPRRLGENAH
SHGHDDDHDH DHDHDHDKKN HDEDGYPKTA RDFDPHAWQN LANGMIYAQN IADGFAEADP
DNALFYKANA ERYIAELKEL DRWVKSEIAK VPAEKRKVIA THDAFGYFGD AYGVEFLAPL
GVGNEAEPSA QALARLIDQI RAENIKALFI ENMSDPRMME TIARETGAEM GGELYSDALS
PEGGPAATYI AMFRHNVPVL VSTMQKN
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