Gene Plav_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2209 
Symbol 
ID5456454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand+ 
Start bp2386349 
End bp2386966 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID640877788 
ProductTetR family transcriptional regulator 
Protein accessionYP_001413480 
Protein GI154252656 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.539658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC CGGTCAGCCG TTCAGCCCCT GCCAAGAAGC CCTCCAAGAA TCGGGAGCAG 
TTGCTCGCCG CCGCCCGGCG CCTTTTCGGC CTGCGCGGCT ATGGGGAGGT GGGCACCGAG 
GAGATCGTCC GGGAGGCGGG GGTGACGCGC GGCGCGCTTT ATTATCAGTT CGCGGACAAA 
CAGGACCTCT TCAGGGCGCT GTTCATTTCG ATGCTGCATG AGATCGGCCA TGAGGTCTTC 
GAGGAGACGA TGGCGCGGGT GACGCATGAC ACCGAAGACC TGATGGTCGG AACGCAAATG 
CTGCTCGACG TCTATTCGCG GGCGGAGGTG AAGCAGATCG TACTGATCGA CGGACCGGCG 
GTGCTTGGCT GGAACGAATG GCGAGACCTG CAGGAGCCGC TTCACCAGGC GATGCTGACC 
CATGCGCTGC AGCATCTGGT GGATGAGGGC TGGCTCGCGC CGCAACCGCT GGAGCCGGTC 
GCGTCGCTGA TCGCGGGTGC GCTGATGCAG GCGGGGCTTG CGATTGCGAA TGCGGACGAT 
CCGGCCGAGG CGCGGAAGAT ATATGGGCGC GGCCTCGAGA CGCTGGTCGA AGGCTTCACG 
CGCCGCCGCA ACGACTAA
 
Protein sequence
MNMPVSRSAP AKKPSKNREQ LLAAARRLFG LRGYGEVGTE EIVREAGVTR GALYYQFADK 
QDLFRALFIS MLHEIGHEVF EETMARVTHD TEDLMVGTQM LLDVYSRAEV KQIVLIDGPA 
VLGWNEWRDL QEPLHQAMLT HALQHLVDEG WLAPQPLEPV ASLIAGALMQ AGLAIANADD 
PAEARKIYGR GLETLVEGFT RRRND