| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2149 |
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| Symbol | |
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| ID | 5454905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2329216 |
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| End bp | 2331087 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877726 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001413420 |
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| Protein GI | 154252596 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.276438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCC ACACCCCCCG CAAGGATGAA GCCCTCACCG TCACCACGGG CCCGCTTCCC
GCCAGCACGA AAATCTTCAC CGCGCCGGAA GGCTTTCCCG GTCTGAAAGT CCCCTTCCGC
GAAATCGCGC TGCATCCTTC CGCCAAGGAG CCGCCGGTGC GCGTCTATGA TACGTCGGGG
CCCTACACGG ACCCGACAGC GCAAATCGAT CTCGAACGGG GCCTGCCGCG CACCCGCGAG
GCCTGGCTCG AAGCGCGCGG CGGCACGGAG CTATACGAAG GCCGCGATGT GAAGCCGGAA
GACAATGGCA ATGTCGGCGA AAAACATCTC GCCCGCGCCT TCCCCGTCCG GAACCTTCCG
CGCCGCGGTC TCCCCGGCCA TCCGGTCACG CAATATGAAT TCGCGAAGGC CGGCATCGTC
ACCGCCGAAA TGGCCTATAT CGCCGAGCGC GAGAATATGG GCCGCAAGCA GGCCGCCGCC
AATGCCGCAC ACAGGATCGC GGAAGGCGAG AGCTTCGGCG CCGATATTCC GGAATTCATC
ACGCCGGAAT TCGTGCGCGA TGAAGTCGCC GCGGGCCGCG CCATCATTCC GTCCAATATC
AATCACCCGG AACTCGAGCC GATGATCATC GGCCGCAATT TCCTCGTGAA GATCAATGCG
AATATCGGCA ACTCCGCCGT CGCCTCGTCG GTCGCGGAAG AAGTCGACAA GATGGTCTGG
GCGATCCGCT GGGGCGCCGA CAATGTCATG GACCTCTCGA CCGGCCGCAA CATCCACAAC
ACGCGCGAAT GGATCATCCG CAATTCGCCG GTGCCCATCG GCACAGTGCC GATCTATCAG
GCGCTGGAAA AGGTCGACGG CATCGCCGAG AACCTCACCT GGGAGGTCTA CCGCGACACG
CTGATCGAGC AGGCGGAGCA GGGCGTCGAT TATTTCACCA TCCATGCGGG TGTCCGCCTC
GCCTATGTGC CGCTCACGGC GAAGCGCGTG ACGGGCATTG TCTCGCGCGG CGGCTCCATC
ATGGCGAAGT GGTGCCTCGC GCATCACAAG GAGAGTTTCC TCTACACCCA CTTCGAGGAA
ATCTGCGACA TCATGCGCCA ATACGATGTG TCGTTCTCGC TGGGCGACGG TTTGCGTCCC
GGCTCCATCG CGGACGCGAA TGACGAGGCG CAATTTGCCG AACTCGAAAC GCTGGGCGAG
CTCACGCAGA TCGCGTGGGC CAAGGGCTGC CAGGTGATGA TCGAAGGCCC CGGTCATGTG
CCGATGCACA AGATCAAGGT CAACATGGAC AAGCAGCTGA AGCATTGCGG CGGCGCGCCC
TTCTATACGC TCGGGCCGCT CACCACCGAC ATCGCGCCGG GCTACGACCA CATCACGTCC
GGCATCGGCG CGGCCATGAT CGGCTGGTTC GGCTGCGCCA TGCTCTGCTA CGTCACGCCG
AAGGAACATC TCGGCCTGCC GGACAGGGCG GACGTGAAGG AAGGCGTCAT CACCTACAAG
ATCGCGGCGC ATGCGGCGGA CCTCGCCAAG GGCCACCCGG CCGCGCAGCT TCGCGACGAC
GCGCTTTCGC GCGCGCGGTT CGAGTTCCGC TGGGAGGACC AGTTCAACCT CGCGCTCGAC
CCCGAACGCG CGAAAGAGTT CCACGACCGC ACGCTGCCGA AGGAAGCGCA CAAGGTCGCG
CATTTCTGCT CCATGTGCGG CCCGAAATTC TGCTCGATGA AAATCACGCA GGAAGTCCGT
GACTATGCGG AAAGCGGCAT GGCCGACATG GCGTCCGAAT TCCGCAATTC CGGCGGCGAG
ATTTATCTCG AAGAAGCGGA CGCGGCGGTG AAGGCATCGA ACAGGGCGCT GGGCGGCAAG
GCGGCGGAGT AG
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| Protein sequence | MNVHTPRKDE ALTVTTGPLP ASTKIFTAPE GFPGLKVPFR EIALHPSAKE PPVRVYDTSG
PYTDPTAQID LERGLPRTRE AWLEARGGTE LYEGRDVKPE DNGNVGEKHL ARAFPVRNLP
RRGLPGHPVT QYEFAKAGIV TAEMAYIAER ENMGRKQAAA NAAHRIAEGE SFGADIPEFI
TPEFVRDEVA AGRAIIPSNI NHPELEPMII GRNFLVKINA NIGNSAVASS VAEEVDKMVW
AIRWGADNVM DLSTGRNIHN TREWIIRNSP VPIGTVPIYQ ALEKVDGIAE NLTWEVYRDT
LIEQAEQGVD YFTIHAGVRL AYVPLTAKRV TGIVSRGGSI MAKWCLAHHK ESFLYTHFEE
ICDIMRQYDV SFSLGDGLRP GSIADANDEA QFAELETLGE LTQIAWAKGC QVMIEGPGHV
PMHKIKVNMD KQLKHCGGAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF GCAMLCYVTP
KEHLGLPDRA DVKEGVITYK IAAHAADLAK GHPAAQLRDD ALSRARFEFR WEDQFNLALD
PERAKEFHDR TLPKEAHKVA HFCSMCGPKF CSMKITQEVR DYAESGMADM ASEFRNSGGE
IYLEEADAAV KASNRALGGK AAE
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