Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2126 |
Symbol | |
ID | 5456813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2307190 |
End bp | 2309115 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877703 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001413397 |
Protein GI | 154252573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.450794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAATT TCAAGAATTT CGCAGTCTGG GTGCTGGGGG CGCTGTTGCT GATCGCCCTC TTCAATCTTT TCCAGAGCCC CGCGCCGCAG GATGGCGCTG GCACGGAGAT TACCTTCTCG CGTCTCTTGT CCGACGTCGA CGCCGGTAGC GTCAGCGATG TGACGATCCA GGGCGAGAAG ATCACCGGTA CCTATTCGGA TGGACGCAAG TTCTCCACCT ATGCGCCTTC GGATCCCTCG CTGGTCGATC GCCTCTACAA CAAGGGTGTC GCGATCACAG CGAAACCTTC CGACGAGAAC GTGCCCTCGT TGCTGGGCGT CCTCGTCTCG TGGTTTCCGA TGCTGCTGCT CATCGCAGTG TGGATTTTCT TCATGCGCCA GATGCAGGGT GGCGGCGGCA AGGCCATGGG CTTCGGCAAG TCCAAGGCGA AGCTCCTCAC CGAGCGTCAT GGCCGCGTGA TGTTCGACGA TGTCGCGGGT ATCGACGAAG CGAAGGACGA TCTCACCGAG ATCGTCGACT TCCTGCGCGA TCCGGCCAAG TTCCAGCGCC TCGGCGGACG TATCCCGAAG GGCGTGCTGC TCGTCGGTCC TCCCGGCACG GGTAAGACGC TTCTTGCGCG CGCCATCGCG GGCGAGGCGA ACGTACCCTT CTTCACGATT TCCGGCTCCG ACTTCGTCGA GATGTTCGTG GGCGTCGGTG CATCTCGTGT ACGCGACATG TTCGAGCAGG CGAAGAAGAA TGCGCCCTGC ATCATCTTCA TCGACGAAAT CGACGCCGTC GGCCGTCATC GCGGTGCCGG TCTCGGTGGC GGCAATGACG AGCGCGAGCA GACGCTGAAC CAGTTGCTGG TCGAGATGGA TGGTTTCGAG CCGAATGAGG GCATCATCCT CATCGCCGCG ACCAACCGGC CGGACGTGCT CGATCCCGCG CTGCTGCGGC CGGGCCGCTT CGACCGTCAG GTCGTCGTGC CGAACCCGGA TGTCGTCGGT CGCGAAAAGA TCCTGAAGGT TCACATGAAA AAGGTGCCGC TGGCGCCGGA TGTCGAGCCG CGTACGATTG CGCGCGGGAC GCCGGGCTTC TCGGGTGCCG ATCTCGCAAA CCTCGTCAAC GAGGCTGCGC TTATGGCTGC GCGCCGCGGC AAGCGCCTCG TCACCATGGC GGAGTTCGAG GACGCAAAAG ACAAGGTCAT GATGGGCGCG GAACGCCGCT CCATGGTCAT GACGGAAGAA GAGAAGAAGC TGACCGCCTA TCACGAAGGC GGCCACGCGC TCGTTGCGCT TCACATGCCG GCTTCCGATC CGATCCACAA GGCAACCATC ATTCCGCGCG GCCGTGCGCT TGGTATGGTC ATGCGCCTGC CGGAGCGGGA CCAGATTTCG GTCACGCGCG AAAAGCTCCA GGCCGACCTC GCGGTCGCGA TGGGCGGGCG TATCGCCGAA GAGCTGATCT TCGGTCACGG CAAGGTGACG TCCGGTGCCT CTTCCGACAT TGCGATGGCG ACGAAGATGG CGAAGGCGAT GGTTACGCGC TGGGGCATGA GCGACAAGCT CGGGCCGCTT GCCTATGGCG AGAATGAGGA AGAAGTATTC CTCGGCCATT CCGTGGCCCG CCAGCAGAAC ATGTCGGAAG AAACGCAGCG CCTGATCGAC TCCGAAGTCC GGGTGATCGT CGAAGGCGGC TACAACACCG CCAAGCAGGT CCTGACGGAT CACATCGATG AGCTTCATAC GATCGCGAAG GGTCTCCTCG AATATGAGAC GCTTTCGGGC GACGAGATCA TCAACCTGCT CAAGGGCGAG CCGCCGGTGC GCGATCGCGG CGAGCCGACG AAGCCGGTCG AAGGGCCGAT TTCGGCAGTG CCGGTCACGG GCAACAAGCC GAGCGATGGC CCGCTGGGTG CGCCGCCTGC TCCTCAGGGG ACATAA
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Protein sequence | MSNFKNFAVW VLGALLLIAL FNLFQSPAPQ DGAGTEITFS RLLSDVDAGS VSDVTIQGEK ITGTYSDGRK FSTYAPSDPS LVDRLYNKGV AITAKPSDEN VPSLLGVLVS WFPMLLLIAV WIFFMRQMQG GGGKAMGFGK SKAKLLTERH GRVMFDDVAG IDEAKDDLTE IVDFLRDPAK FQRLGGRIPK GVLLVGPPGT GKTLLARAIA GEANVPFFTI SGSDFVEMFV GVGASRVRDM FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE PNEGIILIAA TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REKILKVHMK KVPLAPDVEP RTIARGTPGF SGADLANLVN EAALMAARRG KRLVTMAEFE DAKDKVMMGA ERRSMVMTEE EKKLTAYHEG GHALVALHMP ASDPIHKATI IPRGRALGMV MRLPERDQIS VTREKLQADL AVAMGGRIAE ELIFGHGKVT SGASSDIAMA TKMAKAMVTR WGMSDKLGPL AYGENEEEVF LGHSVARQQN MSEETQRLID SEVRVIVEGG YNTAKQVLTD HIDELHTIAK GLLEYETLSG DEIINLLKGE PPVRDRGEPT KPVEGPISAV PVTGNKPSDG PLGAPPAPQG T
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