| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2123 |
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| Symbol | |
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| ID | 5456739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2304081 |
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| End bp | 2304581 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877700 |
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| Product | peptidoglycan-associated lipoprotein |
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| Protein accession | YP_001413394 |
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| Protein GI | 154252570 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.089577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.358435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTCCC CGAATGCTGG CCTGCGGTTC GCCGCTGTGG CTGCTGCTTT TCTGATGTTG
GCCGCGTGCA GCTCGACCGA TGATTCTGCC AACGCCAATC CGTCTTCGTC TTCTTCCGGC
CAGATCACGC CTGGTTCGCA GGAAGACCTG GTTGCCAATG TTGGCGACCG CGTGTTCTTC
GACACGGACC AGTCCTCGCT GAGCGACGAA GCCCGTGCGA CCCTGCAGCG TCAGGCTGCA
TGGATGCAGC TCTACCCGAA CCTCACCTTC ACCGTCGAAG GTCATGCCGA CGAGCGCGGC
ACCCGCGAGT ACAACCTTGC GCTGGGTGGC CGTCGTGCCA ACTCCGCGAA GGATTACCTC
GTGAGCCTCG GCGTCGATGG CGGCCGTCTC AACACCGTGT CCTACGGCAA AGAGCGTCCG
GTGTGCCTCG ACTCGAACGA GAACTGCTGG GCCCAGAACC GTCGCGCTGT GACGGTCGTA
GCGTCCGGCG CCGCGAGCTA A
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| Protein sequence | MKSPNAGLRF AAVAAAFLML AACSSTDDSA NANPSSSSSG QITPGSQEDL VANVGDRVFF
DTDQSSLSDE ARATLQRQAA WMQLYPNLTF TVEGHADERG TREYNLALGG RRANSAKDYL
VSLGVDGGRL NTVSYGKERP VCLDSNENCW AQNRRAVTVV ASGAAS
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