Gene Plav_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2115 
Symbol 
ID5454487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2297431 
End bp2297958 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID640877692 
Productcrossover junction endodeoxyribonuclease RuvC 
Protein accessionYP_001413386 
Protein GI154252562 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0681536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.335061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTT CGCTTACATA TCTCGGCATC GATCCCGGCC TCACTGCCAC GGGTTGGGGT 
GTGATAGGGA TATCCGGTTC AAGGCTTACT CACATCGCCA ATGGAACAAT CACCTCCAAC
GCGCGGCTGA GCCTTGCCGA ACGTCTGGTG CAGATCGAAG CGGGGCTGGT GCAGGTCATC
CATGAACATG CGCCCGACGC TGCGGCAGTG GAGCAAGCCT TCGTCGCCAG AGATGCGTCG
GCTGCATTGA AACTCGGACA GGCCCGAGCC ATCGCGCTTC TCGTTTCGGC GCGGGCGGGA
CTCGCCGTGG CGGAATACGC ACCAAACCAT GTGAAAAAGT CCGTCGTCGG CGCCGGTCAT
GCCGACAAGA GCCAGATTCG TTTGATGGTC GAGATGCTGC TGCCAGGCGC GAAGGCCGGC
AGCGAGCACG CGGCCGATGC GCTTGCGCTG GCGATTTGCC ATGCGCATTC GGGCTCTGCG
AATGAGCGCA TCGCCGCGGC GCTGCTGCGG GCAGGAGCCG GACGATGA
 
Protein sequence
MPVSLTYLGI DPGLTATGWG VIGISGSRLT HIANGTITSN ARLSLAERLV QIEAGLVQVI 
HEHAPDAAAV EQAFVARDAS AALKLGQARA IALLVSARAG LAVAEYAPNH VKKSVVGAGH
ADKSQIRLMV EMLLPGAKAG SEHAADALAL AICHAHSGSA NERIAAALLR AGAGR