| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2114 |
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| Symbol | |
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| ID | 5456185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2296581 |
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| End bp | 2297327 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877691 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413385 |
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| Protein GI | 154252561 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.308852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.355584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCC ACTCACAATT CAAGAACATC ATGTACCGCA AGGGCGCGCA GGATAAGAAG
CGCTCCAAGC TGTTCGCTAA GCTGGCCAAG GAAATTACCG TGGCGGCCAA GATGGGCCTG
CCTGACCCTG AGTACAATCC GCGGTTGCGC GCGGCGATCC AGGCCGCCCG TGTCGAGAAT
ATGCCCAAGG ACAATATCGA GCGCGCGATC AAAAAGAGCT CGGACCAGGG TGGAGAAAAC
TACGAAGAAG TGCGGTACGA GGGCTTTGGG CCCGGCGGCA TCGGTGTCAT CGTCGAGACC
CTGACCGACA ATCGCAACCG CACGGCAGGC GAAGTGCGGT CGATCTTCAC CAAGAATGGC
GGCAATCTCG GCGAAACGGG CGCCGTCTCG TTCATGTTCG ACCGGCTCGG CCTCATCGAA
TATCCGGCAG ACGCCGCCAG TGCCGATGAC ATGATCGAGG CCGCGATCGA GGCGGGAGCC
GATGATTGCC AGTCGGGCGA GGCAGGCCAC GAACTCTATT GTGCGCCCGA TGCACTGCAT
GAGGTGGCGC AAGGCCTTGA GTCGAAATTC GGCGAGGCGC GGGCGGCCCG CATCGTCTGG
AAGCCGCAAA ACACGATCGC ACTCGAAGAC GAAAAGGCCG AGACCGTCCT AAAAATGCTC
GAAGCGCTGG ACGACAACGA CGATGTGCAG CAGGTTTATG CGAACTTCGA GATGTCCGAT
TCGCTGATGG AGAAGATGTC CGCCTGA
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| Protein sequence | MAGHSQFKNI MYRKGAQDKK RSKLFAKLAK EITVAAKMGL PDPEYNPRLR AAIQAARVEN
MPKDNIERAI KKSSDQGGEN YEEVRYEGFG PGGIGVIVET LTDNRNRTAG EVRSIFTKNG
GNLGETGAVS FMFDRLGLIE YPADAASADD MIEAAIEAGA DDCQSGEAGH ELYCAPDALH
EVAQGLESKF GEARAARIVW KPQNTIALED EKAETVLKML EALDDNDDVQ QVYANFEMSD
SLMEKMSA
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