| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2092 |
|---|
| Symbol | |
|---|
| ID | 5454187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2275455 |
|---|
| End bp | 2276453 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877669 |
|---|
| Product | quinone oxidoreductase putative PIG3 |
|---|
| Protein accession | YP_001413363 |
|---|
| Protein GI | 154252539 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.187867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.000106437 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC TCCCCAAAAC CATGAAAGCC ATAGCCATCC GCGAACCGGG CGGCCCTGAG
GTGCTGGAAT TGCGCGAGAT CGCGACCCCG GAGCCGGGCC ATGGCGAAAT CCTCATCAAG
GTCGCGGCTG CCGGCATCAA CCGCCCCGAC ACGATCCAGC GCATGGGCCT CTACCCGGCG
CCGCCCGGCT CCCCCGAAAC GCCGGGTCTC GAGGTCGCGG GTGAAGTTGT TGCGACGGGA
CCCGGCGTGA CGATGTGGAA AGCGGGCGAC AAGGTCTGCG CGCTGGTCGG CGGTGGCGGC
TATGCGGAAT ACTGCCTCGC ACATGAGGCG CATGCCCTGC CCGTACCGCA AGGCTTCACG
ATGACGGAAG CAGCGGCGCT GCCGGAAACA TTCTTCACGG TCTGGACCAA CGTCTTCGAG
CGCGGTGCGC TGAAACCCGG CGAGACGCTT CTCGTGCATG GCGGTTCGAG CGGCATCGGC
ACGACGGCGA TACAGCTCGC GTCGCTTTTC GGCTCGACCG TGATCGCAAC AGCGGGCTCC
GCCGAGAAAT GCGCGGCGTG CGAAAAACTT GGCGCGCATG CGGCGGTGAA TTACCGCGAG
CAGGATTTCG TGGCCGAAGC AAAGCGGCTG ACGGATGGAC GCGGCGTCGA CGTCATTCTC
GACATGGTGG GCGGAGATTA TATTGCGCGC AACATTCAGG CCTGCGCGAC AGATGGACGG
ATCGTCTCCA TCGCCTTTCT CAATGGATCG ACGGCGGAAG TGAATTTCAT GCCGGTCATG
CTGAAACGGC TGACGCTGAC CGGCTCGACA TTGCGGCCGC GCAGCATCGA GGAGAAGGCG
GCGCTGGCAT CGGCACTCAA GACGAAAGTG TGGCCCCTAC TCGATGCCGG TCGCGTAAAG
CCGCAGATCG ACAGCGTTTT TCCGCTGGCG GATGCAGCAA AAGCCCATGC CCTTATGGAA
AAAAGCAGCC ATATCGGCAA GATCGTATTG ACGGTCTGA
|
|---|
| Protein sequence | MTTLPKTMKA IAIREPGGPE VLELREIATP EPGHGEILIK VAAAGINRPD TIQRMGLYPA
PPGSPETPGL EVAGEVVATG PGVTMWKAGD KVCALVGGGG YAEYCLAHEA HALPVPQGFT
MTEAAALPET FFTVWTNVFE RGALKPGETL LVHGGSSGIG TTAIQLASLF GSTVIATAGS
AEKCAACEKL GAHAAVNYRE QDFVAEAKRL TDGRGVDVIL DMVGGDYIAR NIQACATDGR
IVSIAFLNGS TAEVNFMPVM LKRLTLTGST LRPRSIEEKA ALASALKTKV WPLLDAGRVK
PQIDSVFPLA DAAKAHALME KSSHIGKIVL TV
|
|---|
| |