| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2091 |
|---|
| Symbol | |
|---|
| ID | 5453383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2274790 |
|---|
| End bp | 2275350 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640877668 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_001413362 |
|---|
| Protein GI | 154252538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2930] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0577412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0000798401 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACAA CACGGCGCAG CCTGATGGCA GTCCTCTTCG CAGCCGCGGC GCTGGTTTCA
CTGGGAACCA TTGACACCGC AAAGGCCGCA ACGGCGGAAG ATCTCAACAC CGAAGCGCAG
CACGCGCTCG ACAAGCTCTA CAAGACCAAC TCTGTCGCCA AGGACATCTC CGAAAAGGCA
GAAGCCATTC TCGTCTTTCC GAGCATCGTG AAGGCCGGCC TCGTTTTCGG CGGCGCCTAT
GGTGAAGGCG TGCTGATGGA AGACGGCAAG GTCAACAATT ACTACAACTC CGTGACCGGT
TCCTGGGGTC TGCAGGCCGG CGCCCAGTCC TACGGCTATG CGGTTTTCCT CATGAATGAC
GAAGCCGTGA AATATCTGAA GGACTCGCAT GGCTGGGAAG TCGGCGTTGG CCCGACGGTG
GTCGTGGTTG ATGAGGGCAT CGCCAAGAAC CTCTCGACTT CGACGCTGAA AGAGGACGCC
TATGCGTTCA TTTTCGACCA GTCGGGCCTG ATGGCCGGCG TGAGCATCGA GGGCACGAAG
ATCACCGAGA TCAACCGCTA A
|
|---|
| Protein sequence | MATTRRSLMA VLFAAAALVS LGTIDTAKAA TAEDLNTEAQ HALDKLYKTN SVAKDISEKA
EAILVFPSIV KAGLVFGGAY GEGVLMEDGK VNNYYNSVTG SWGLQAGAQS YGYAVFLMND
EAVKYLKDSH GWEVGVGPTV VVVDEGIAKN LSTSTLKEDA YAFIFDQSGL MAGVSIEGTK
ITEINR
|
|---|
| |