| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2083 |
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| Symbol | |
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| ID | 5454407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2266279 |
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| End bp | 2267907 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877660 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001413354 |
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| Protein GI | 154252530 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.656252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000000010579 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACGA ACCCCTATGA AACCGACCTC GACCGGAATG CGGCGAACCA TCAGCCGTTG
ACGCCGATGA GTTTCCTGAA GCGGGCGGCG GAGGTTTATC CGGGGAAGCT CGCCGTGGTG
CATGGGAGCA TCCGCCGCGA CTATGCGGAG TTTTATGCGC GCTGCCGGAA GCTCGCCTCG
GCGCTCAGCG AGCGGGGCAT CGGGCTTGGC GACACGGTGG CGGTGATCGC GCCGAACATT
CCGGCAATGC TGGAACTGCA TTATGCCGTG CCGATGATCG GCGCGGTGCT GAATACCATG
AACATCCGCC TCGACGGCGC CATCATCGGC TTCATGCTGG ATCATGGCGA GGCGAAGGCG
CTGTTCGTCG ACCGCGAATT TTCCGCGCTC GGCAAGGAGG CGCTTTCCAA GGCGAAGGTG
AAGCCCTTCG TGATCGACAT CGACGACGCG GAATATGACG GGCCGGGCGA CAGGATCGGC
GAGGCGGAAT ATGAGGATTT TCTCGCACAA GGCGATGCGA AATTCGACTG GTCGCTGCCC
GCCGACGAGT GGCAGGCGAT CAGCCTCAAT TATACGTCGG GCACGACCGG CAATCCGAAA
GGCGTCGTCT TCCATCATCG CGGCGCCTAT CTGCTGGCGA TGGGCAATAT CGTGACGGCG
GGCATGACCG GCAATTCCGT CTATCTCTGG ACGGTGCCGA TGTTCCATTG CAACGGCTGG
TGCTTCACCT GGTCGATGAG CGTCATCGCG GGCACGCATG TGTGCCTGAG GCGCGTGACG
GCGGCGAACA TCTTCAGCGC CATCGCGGAA CATGGCGTGA CGCATATGGC GGGCGCGCCG
ACCGTGATGA GCTTTCTCAT CAATGCGACG GAGGAGGAGA AGAAACCGCT GCCGCACACG
GTTTCCTATT TCGCCGCCGC CGCGCCGCCG CCCGCCGCGA CCATCCGCAA GCTCGAGGCG
GAAGGCTTCA ACGTGATCCA TGTCTATGGC CTCACCGAAA CCTACGGCCC CGCAGTGGTG
AACGCCTGGC ACGACGAATG GGACGAGCTG GAAGTGAATG CGCGGGCGCA GGTGAAGGCG
CGGCAGGGCG TGAACTATCC CGTGCTCGAA GGGATTTCCG TGCGCGACCC GGAGACGATG
GAGGAAGTGC CGCGCGACGG CGAGACCATG GGCGAGGTCA TGTTCCGCGG CAATGTGGTG
ATGAAGGGCT ACCTCAAAAA CCCGAAGGCG AGCGCGGAAG CCTTTGCCGG CGGCTGGTTC
CACTCGGGCG ATCTCGGCGT CTGGCATCCC GACAATTATA TTCAGCTCAA GGACCGCTCG
AAGGACATCA TCATTTCCGG CGGCGAGAAC ATCTCCTCTC TCGAAGTCGA GGACGTGCTC
TACAAGCATC CCGACATCAT CGAGGCGGCT GTCGTCGCGC GGCCGGATGA GAAATGGGGC
GAGACGCCCT GCGCCTTCAT CACGCTCCGC AAGGGCGCTT CGCTCACCGA AAAGGACGTG
ATCGCCTATT GCCGCGAACA CCTGGCGCAT TTCAAATGCC CGAAGACGGT GGTTTTCACC
GACCTGCCGA AAACCTCCAC GGGCAAGGTG CAGAAATTCA AGCTCAGGGA GCAGGCGGGG
GAGCTTTAG
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| Protein sequence | MTTNPYETDL DRNAANHQPL TPMSFLKRAA EVYPGKLAVV HGSIRRDYAE FYARCRKLAS
ALSERGIGLG DTVAVIAPNI PAMLELHYAV PMIGAVLNTM NIRLDGAIIG FMLDHGEAKA
LFVDREFSAL GKEALSKAKV KPFVIDIDDA EYDGPGDRIG EAEYEDFLAQ GDAKFDWSLP
ADEWQAISLN YTSGTTGNPK GVVFHHRGAY LLAMGNIVTA GMTGNSVYLW TVPMFHCNGW
CFTWSMSVIA GTHVCLRRVT AANIFSAIAE HGVTHMAGAP TVMSFLINAT EEEKKPLPHT
VSYFAAAAPP PAATIRKLEA EGFNVIHVYG LTETYGPAVV NAWHDEWDEL EVNARAQVKA
RQGVNYPVLE GISVRDPETM EEVPRDGETM GEVMFRGNVV MKGYLKNPKA SAEAFAGGWF
HSGDLGVWHP DNYIQLKDRS KDIIISGGEN ISSLEVEDVL YKHPDIIEAA VVARPDEKWG
ETPCAFITLR KGASLTEKDV IAYCREHLAH FKCPKTVVFT DLPKTSTGKV QKFKLREQAG
EL
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