| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2074 |
|---|
| Symbol | |
|---|
| ID | 5456862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2259351 |
|---|
| End bp | 2260184 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640877651 |
|---|
| Product | sulfate ABC transporter, inner membrane subunit CysW |
|---|
| Protein accession | YP_001413345 |
|---|
| Protein GI | 154252521 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0230332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 6.41396e-23 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCG ATGAAAGCCG GACTGTAAAA ACCGCACTTA TTGCAACGAG CTTCGTCTTT
CTCGGCCTTG TGCTGATATT GCCGCTTGCC TCCGTCTTCA CGGAAGCCTT CCGGCGCGGC
GCCGAACCTT TCTTCGCCGC GCTCGTCGAA CCGGATGCGC TCTCCGCCGT CTGGCTGACG
CTTTTCGTGG CGGCGATCGC GGTGCCCGCC AATCTCGTCT TCGGGCTCGT TGCCTCATGG
GCGATCGCGA AGTTCGAGTT CAAGGGCAAG TCGTTTCTCA TCACGCTGAT CGACCTGCCC
TTCTCCGTCT CGCCGGTCAT CTCGGGGCTC GTCTATATCC TGCTCTTCGG CTCCTACGGC
TTCTTCGGGC CGTGGCTGAT CGAAAACGGC ATCCAGATCG TCTTCGCGGT GCCGGGCATC
GTGCTTGCCA CCATCTTCGT CACCTTTCCC TTTGTCGCGC GCCAGCTCAT TCCGCTGATG
GAGCAACAGG GCACGGGCGA CGAGGAGGCC GCGCTGTCGC TCGGTGCGTC GGGCTTTCAG
ACCTTTCGCA AGGTGACGCT GCCCAACGTC AAATGGGCGC TGCTCTACGG CGTTCTTCTC
TGCAACGCGC GCGCGATGGG CGAGTTCGGC GCCGTCTCCG TCATATCGGG TCATATCCGC
GGCAAGACAA ACACCATGCC GCTTCATGTG GAGATCCTCT ACAATGAGTA CAATTTCGTT
GCCGCCTTCG CGGTTGCCTC TCTCCTGGCT TTCCTCGCCC TCGTCACCCT CGTCCTCAAA
TCGCTCCTCG AATGGCGGTA CGGTGGTGAA CTTGCCGCGA GCGGGCGCCA CTAA
|
|---|
| Protein sequence | MQTDESRTVK TALIATSFVF LGLVLILPLA SVFTEAFRRG AEPFFAALVE PDALSAVWLT
LFVAAIAVPA NLVFGLVASW AIAKFEFKGK SFLITLIDLP FSVSPVISGL VYILLFGSYG
FFGPWLIENG IQIVFAVPGI VLATIFVTFP FVARQLIPLM EQQGTGDEEA ALSLGASGFQ
TFRKVTLPNV KWALLYGVLL CNARAMGEFG AVSVISGHIR GKTNTMPLHV EILYNEYNFV
AAFAVASLLA FLALVTLVLK SLLEWRYGGE LAASGRH
|
|---|
| |