Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2027 |
Symbol | |
ID | 5456232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2213980 |
End bp | 2215035 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877604 |
Product | saccharopine dehydrogenase |
Protein accession | YP_001413298 |
Protein GI | 154252474 |
COG category | [S] Function unknown |
COG ID | [COG3268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0488088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.664425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC GGTTCATGAT CTATGGCGCC ACCGGCTATA CCGGCAAACT TGTGGCGCGC ACCGCGAAGA CACTCGGCAT GAAGCCTTTG CTGGCCGGCC GCAACGAAGC CCGCCTGAAA TCCATCGCCG CTCAGCATGG CTTCGAGTAT CAGGCCATCT CGCTCGACGA GCCGGAGGCG CTCGATGCCG GGCTCTCCCA GGTCGATGTC GTGCTCCACA TCGCCGGTCC CTTCTCGCAA ACATCGAAGC CGATGGTGGA GGCGTGTCTG CGCACCGGCA CGCATTATCT CGACATTACC GGCGAGATCG ATGTTTTCGA GGCCTGTGCC GCGCGCGACG AGGCGGCGCA GAAGGCTGGC GTCATGCTGA TGCCCGGCGT CGGTTTCGAT GTCGTGCCGA GCGATTGTCT TGCCGCTCAC ATGAAGACGC GGATGCCGGA TGCGGTTGAG CTCACGCTCG GCATTTCCGG TCTCGGTCAC ATGTCGCATG GCACCGCCAA GACCGGCGTC GAAAGCATCG GCAAGGGCAC GCGCATCCGT CGCGATGGCC GCATTGTCTC CGCAAAGAAG CCGCTTCGCC GCGAGATCGA TTTCGGACAA GGCGCCAAGC CGTCGATCGC GATCGGGTGG GGCGATGTCT CCACCGCCTG GCACTCCACG AAGATCCGGG ACATCACCGT CTATTTCGAG AGCAATCCGC AATTCGAGCA AATGGCAAAG CTCGGCGCCT TCATGCGCTG GGTAATGAGC CGGGGGCCGA TGCAGCGGGC GCTTAAAAAG CGCATCGAAC AGCAACCCGA AGGGCCGACG GACGAGCAGC GCCGCGAAGG CTTCGCCGTT CTCTTCGGCG AGGCCGTCAA TGCCGAGGGC GCGCGCGTCC AGTCGCGCCT GCAAACGCCC GAAGGCTACA CGCTGACGGC AATGACCGGC CTCGAGATCG TCCGGCGGGT GCTCGCCGGC GATGCGCAGC CTGGTTTCCA GACGCCGTCT TCGGTATTCG GGGCCGATTT CATCACGGAA TTCGAGGGCT GCACCCGGCA GGACCTCAAC GGCTGA
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Protein sequence | MSDRFMIYGA TGYTGKLVAR TAKTLGMKPL LAGRNEARLK SIAAQHGFEY QAISLDEPEA LDAGLSQVDV VLHIAGPFSQ TSKPMVEACL RTGTHYLDIT GEIDVFEACA ARDEAAQKAG VMLMPGVGFD VVPSDCLAAH MKTRMPDAVE LTLGISGLGH MSHGTAKTGV ESIGKGTRIR RDGRIVSAKK PLRREIDFGQ GAKPSIAIGW GDVSTAWHST KIRDITVYFE SNPQFEQMAK LGAFMRWVMS RGPMQRALKK RIEQQPEGPT DEQRREGFAV LFGEAVNAEG ARVQSRLQTP EGYTLTAMTG LEIVRRVLAG DAQPGFQTPS SVFGADFITE FEGCTRQDLN G
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