Gene Plav_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2023 
Symbol 
ID5453503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2210768 
End bp2211247 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID640877600 
Productresponse regulator receiver protein 
Protein accessionYP_001413294 
Protein GI154252470 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0939204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.968357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTG AGAAGCTGAA TCGCCGCCGC ACCTTCAAAA TGAATGTCCT GTGGTGGATG 
ACGGGCCTAG ATGGCGGCTC GAAAGGCGGG GCAGGTGGCG AAAAGGCTCC ATCACCGGGG
CTGCCGCTTT CCGGCAAGAC GGTGCTTGTG GTCGAGGACG AGTTTTTCGT CGGACTTGAG
ATCGCCCAGA CGCTCGAAGC GGCGGGCGCC GATGTCATCG GCCCGGCCCG CTCGGTAGAA
GAGGCGGAAG AACTGCTCGG CGGCGGCACG CTCGATATGG CGGTGCTCGA TGTCGATCTC
GACGGCCAAT ATTCCTTCGA CCTCGCGCTC GCCCTTCAGC AGCGCGGCGC CCGCGTCGTC
TTCGCGACAG CACATGCAGA CGATAGCGGT CTCTTCCGTG GCCCCATCGC CGCAATTCCC
CGCATCGGCA AGCCGACTAC CGCGCGCGCC CTGTTGCGCA CCCTTCTGCC GCTCTCCTGA
 
Protein sequence
MIVEKLNRRR TFKMNVLWWM TGLDGGSKGG AGGEKAPSPG LPLSGKTVLV VEDEFFVGLE 
IAQTLEAAGA DVIGPARSVE EAEELLGGGT LDMAVLDVDL DGQYSFDLAL ALQQRGARVV
FATAHADDSG LFRGPIAAIP RIGKPTTARA LLRTLLPLS