| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2004 |
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| Symbol | |
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| ID | 5456754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2190988 |
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| End bp | 2191824 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877581 |
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| Product | taurine dioxygenase |
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| Protein accession | YP_001413275 |
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| Protein GI | 154252451 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.316372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCC AGGTGAAGCC GATTTCCGGC GCTCTCGGCG CTGAAATCGA AGGCGTGGAC
CTGTCCAAGG ACCTCTCCAA CGAGACTTTC GACGATATCC ATCAGGCATT TCTCGACCAT
GTCGTGATTT TCTTTCGCGA CCAGCAACTC AGTCATGAAC AGCACAAGGC TTTCGGCCGG
CGCTTCGGCA CGCTGAACAT CCATCCTTAC GTGAAGGGAA TGGAGGGGCA CCCGGAAATC
ATGCAGATCG TGAAGGAGCC GGAGGATCGC TTGAATTTCG GCGGCGGCTG GCATTCCGAC
ATGTCGTTTC TCGAAGAGCC GGCTCTCGGC TCGATCCTTT ATGCGAAGGA AGTCCCTCCC
TATGGCGGCG ACACGCTATG GGCGAACCAG TATCTCGCTT ATGAAACACT GTCGGACGGC
ATGAAGGCGA CGCTCGACGG TCTGAAGGCC GTACATACGG CAAAGGGCGA ATACAGCGAG
CGGGGCGCTT CCGCCCAGGC ACGAAAATCC ATGGATGTCG CAACTGCCGG TGACGACACA
CCCTCCTATG AGCACCCTGT GGTGCGCACG CATCCGGAAA CCGGCCGCAA GGCGCTTTAT
GTGAACCCCG CCTTTACCGA AAAATTCGTC GGCTGGACGA GGCGCGAGAG CCGGCCGCTT
CTGAATTTCC TGTTCGAGCA CTGCACGCAG GAGCCTCTCA CGTGCCGCTT CCGCTGGACA
GCGAACGCCC TCGCCTTCTG GGACAACCGC GCCGCGCAGC ACTTCGCACT GAACGATTAT
CACGGCCATC GCCGTCATAT GGAACGAGTG ACCGTAAACG GCGACCGGCC TTTCTAG
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| Protein sequence | MTIQVKPISG ALGAEIEGVD LSKDLSNETF DDIHQAFLDH VVIFFRDQQL SHEQHKAFGR
RFGTLNIHPY VKGMEGHPEI MQIVKEPEDR LNFGGGWHSD MSFLEEPALG SILYAKEVPP
YGGDTLWANQ YLAYETLSDG MKATLDGLKA VHTAKGEYSE RGASAQARKS MDVATAGDDT
PSYEHPVVRT HPETGRKALY VNPAFTEKFV GWTRRESRPL LNFLFEHCTQ EPLTCRFRWT
ANALAFWDNR AAQHFALNDY HGHRRHMERV TVNGDRPF
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