| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1984 |
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| Symbol | |
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| ID | 5456261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2167654 |
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| End bp | 2169501 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877560 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001413255 |
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| Protein GI | 154252431 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTC GGAATATCGC GATCATCGCC CATGTTGACC ATGGGAAGAC GACGCTGGTC
GATCAGTTGC TTCGCCAGTC CGGCACCTTC CGCGACAACC AGCAGGTTGT CGAACGGGTC
ATGGACTCGA ACGACCTGGA AAAAGAGCGC GGCATCACCA TTCTCGCCAA GCCGACAAGC
GTCGACTGGG TCGACGATGC GGGCGTGCAC ACACGCATCA ACATCATCGA CACGCCGGGC
CATGCGGACT TCGGCGGCGA GGTGGAACGC ATCCTCTCGA TGGTGGACGG CGTGGTGTTG
CTGGTGGACG CGGCCGAGGG CCCGCTGCCG CAGACCAAAT TCGTGACCTC GAAGGCGCTG
GCGCTGGGCC TGAAGCCGAT CGTGCTCATC AACAAGGTCG ACCGTTCCGA CGGCCGCCCG
GAAGAAGTGC ATATCGAGGC CTTCGACCTT TTCGCCGCAC TCGGCGCGAC CGACGAGCAG
CTCGACTTCC CCTGCATCTT CGCTTCGGCC CGCCAGGGCT GGGCCGCGGA AGACCTGAAC
GCGCCGGACG CGCGCGACAA CGGGCTGAAG CCGCTTTTTG CCAAGATCAT CTCGCATTTC
CCGGAACCGG CGGCGCTGCA TGACGGCTCC GAGAACGAGC CCTTCGCGAT GCTGGTGACG
ACCATCGAGA GCGACCCCTA TCTCGGGCGC ATCCTGACCG GCAAGATCGA GAAGGGCACG
GTCAAGACCA ACATGAACGT GCAGGTGCTG CGCATGGAAG GCGGCGTTGT CGAACGCGGC
CGCATCAGCA AGGTGCTCGC CTTCCGCGGC ATCCAGCGCA TTCCGGTGGA AGAGGCAAGC
GCGGGCGACA TCATCGCCAT TGCCGGCCTG ACACAGGGCA CCGTTGCCGA CACGATCTGC
GACGCTTCCG TGACGGAACC GCTGAAGGCG CTGCCGATCG ACCCGCCGAC GCTTTCCATC
ACCGTTTCCA TCAATGACAG CCCGCTGGCC GGCCGCGAAG GCAGCAAGGT GCAGTCGCGC
GTGATCCGCG ACCGCCTGAT GCGCGAAGCC GAAAGCAATG TGGCCATCCG CGTCAGCGAC
TCGGAAGGCG GCGACGCCTT CGACGTGGCG GGCCGCGGCG AATTGCAGCT CGGCGTGCTG
ATCGAAACCA TGCGCCGCGA CGGCTTCGAA CTCGGCATCT CGCGCCCCCG CGTGCTCTTC
CGCGAGGACG ACAAGGGCAA CCGCCTCGAA CCGATCGAGG AAGCAACCAT CGACGTGGAC
GACGAGTTCA CCGGCGTCGT CATCGAGAAG ATGTCGAGCC GCAAGGGCGA ACTGGTCGAC
ATGCGCCCGA CCGGCGCCGG CAAGACGCGC ATCATCTTCC ATTGCCCGTC GCGCGGCCTC
ATCGGCTATC ACGGCGAATT CCTGACCGAC ACGCGCGGCA CGGGCGTCAT GAACCGCATC
TTCCATGCCT ATGAGCCCTA TCGCGGCGAA ATCGAAGGCC GCCGCAACGG CGTGCTGATC
TCGACCGGCG ACGGCGAAGC GGTGCCTTAC GGCCTCTGGT ATATCGAGGA ACGCGGCACG
CTGTTCATCT CGCCCGGCGA GAAGGTCTAT CGCGGCATGA TCATCGGCGA GAATGCGCGC
CCCGACGATC TCGACGTGAA CCCGCTGAAG GCGAAGCAGC TCACCAACAT CCGCACGACC
TCGAAGGACG AAGCCGTCCG CCTGACACCG CCCCGGCCGC TGACGCTCGA ACAGGCGATT
GCCTATATCG AGGCAGACGA GCTGGTGGAG GTGACGCCGA AGTCGATCCG GCTCCGCAAG
CGCTATCTCG ACCCGAACGA GCGCAAGCGT TTCGCCCGGG CAGGGTAA
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| Protein sequence | MSIRNIAIIA HVDHGKTTLV DQLLRQSGTF RDNQQVVERV MDSNDLEKER GITILAKPTS
VDWVDDAGVH TRINIIDTPG HADFGGEVER ILSMVDGVVL LVDAAEGPLP QTKFVTSKAL
ALGLKPIVLI NKVDRSDGRP EEVHIEAFDL FAALGATDEQ LDFPCIFASA RQGWAAEDLN
APDARDNGLK PLFAKIISHF PEPAALHDGS ENEPFAMLVT TIESDPYLGR ILTGKIEKGT
VKTNMNVQVL RMEGGVVERG RISKVLAFRG IQRIPVEEAS AGDIIAIAGL TQGTVADTIC
DASVTEPLKA LPIDPPTLSI TVSINDSPLA GREGSKVQSR VIRDRLMREA ESNVAIRVSD
SEGGDAFDVA GRGELQLGVL IETMRRDGFE LGISRPRVLF REDDKGNRLE PIEEATIDVD
DEFTGVVIEK MSSRKGELVD MRPTGAGKTR IIFHCPSRGL IGYHGEFLTD TRGTGVMNRI
FHAYEPYRGE IEGRRNGVLI STGDGEAVPY GLWYIEERGT LFISPGEKVY RGMIIGENAR
PDDLDVNPLK AKQLTNIRTT SKDEAVRLTP PRPLTLEQAI AYIEADELVE VTPKSIRLRK
RYLDPNERKR FARAG
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