Gene Plav_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1961 
Symbol 
ID5453835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2139773 
End bp2140102 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID640877538 
Productbranched-chain amino acid transport 
Protein accessionYP_001413233 
Protein GI154252409 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACA GCAATACCGT CTGGCTCATC ATCATTGCTG TTGGCATCGG CACTTTCGCG 
CTGAGATTGT CGTTCATCCA GCTCGCAGGC CGCGTTGCTC TTCCCGCGTG GGCAGCGCGG
GCGTTGCGTT TCATACCGGC CGCAGTATTG AGCGCCATCA TCCTGCCGGC CGTCTTGCGC
GGCGCCGATG GCTCCCTCGA CATAGCGATC GATAATCCTC GCCTCATCGC CGGCGCGTTC
GCCACCCTGA TCGCATGGTG GACGAAGAGC GTGCTTGCAA CGCTCGCGGC CGGCATGTGC
GCTCTCTGGA TTCTTCAGGC TATTTTCTAG
 
Protein sequence
MMDSNTVWLI IIAVGIGTFA LRLSFIQLAG RVALPAWAAR ALRFIPAAVL SAIILPAVLR 
GADGSLDIAI DNPRLIAGAF ATLIAWWTKS VLATLAAGMC ALWILQAIF