| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1935 |
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| Symbol | |
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| ID | 5454024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2107369 |
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| End bp | 2108940 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877512 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001413207 |
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| Protein GI | 154252383 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.345754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACCG TGTATAATTG CATAACGGTC GAACACGACC TGCGCCTCGT GGTCCTGGCG
GCGCTTCTGT GTCTGTTCGC GAGCTTTTCC TCGATCAGCC TTTTCGCGCG TGCGCGGGAA
GCCGGGTTGC GACAACGCTC GCTCTGGGTT CTCGCATCCG GATTCGTCGC CGGCTGCGGC
ATATGGGCGA CGCACTTCAT TGCGATGCTC GCCTTCCAGC CGGAAACGCC GACAAGCTAC
CAGCCGGGCC TGACATTCGC CTCGCTCATG ATCGCGATCA TGTTTGCAAC CATCGGCTTC
GCCATCGCGG ACCGTTACCG GCCTTCAGGA ACAGGCGGCG CCGTTGTGGG CCTGAGCATC
GGGGCTATGC ACTATGTCGG CATGGCCGCA ACCAGCATGC ACGGCCAGAT GATCTGGGAC
CGGGACTATG TCGCCGCGTC GATCGTCCTT GGCGTGGTAC TCGGCGCGGC GGCAACGCAA
GCGGCCGGTT CTCTTTCGGG CCTGCGGGGA CGCATCATCG GCGCAGGCCT TCTGACACTG
GCCATTGCCT CACTCCATTT TACCGGCATG GCGGCCGTCA CCGTGAGCTA CGACGCGGCT
GCACAGGTCG CATCCAACGC CGTCGAGCCT TATACCGTCG CGATTGCCGT CGCCGCGGTG
ACGCTTCTGA TCGTTATTCT GGCTTTTGTC GGCTCCGCCG TGGAGCGGCA TCTCGCCGAC
CGGTCGGTGC AGGAAACGAT ACGTCTCCGC GCGCATGTGC TCGAACTGGA TGAGACCCGC
AAGCAGCTCG AAAAGACCTC TGCCGAGCTT CTCGTCGCGC TGCAAAGCGC TTCATCGGCA
GATCAAGCGA AATCGCAATT CCTCGCGACG ATGAGCCACG AGCTTCGCAC GCCTCTGAAT
GCCATTCTCG GATTCTCCGA GATCATGGCC GCCGAGACTT TCGGCCCGCT CAACAATGCC
CGCTACAGCG ACTATGTGCA GGACATATTC AAGAGCGGCA AGCACCTGTT GTCGTTGATA
AACGACGTAC TTGATTTCAC GCGCGTGGAT GCGGGGGAGC TGCATCTTCA TGAAGAAGAT
ATCGACCTCG AAGAAGCGGT GACAGACACC ATTCGCATGA TCTCGGCGCA AGCCAAGGCG
CAGAACATCG CGCTCGACTA TGAGATTGCC GCGGACCTGC CGCATCTGAT CGCCGATCAC
CGCCGTATCC GTCAGGTGTT GCTGAACCTT CTCTCCAACG CGGTGAAGTT CACGCCGGAC
GGGGGCGAAG TCCACATCGG AGCCCTGGTC GCGGACGGCG CGATGCTGCT GCGCGTCACC
GATACGGGCA TCGGCATCGC CGCGGAGAAC ATTCCGCTGG CACTGGAACG CTTCGGACAG
ATTGATTCCG ATCTCTCCAG AAAATATGAA GGAACCGGCC TAGGTCTTCC GCTTGCCAAA
TGCCTGATGG AACATCACGG CGGCTGCCTC GACATTGCGA GCGAACTCGG CCGTGGCACC
ACGGTGACGG TTACATTCCC GCCTGAACGC GTGGTGGCGG CAGCGCAGCA CCCACTCCCC
ATGCGGGCAT AG
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| Protein sequence | MLTVYNCITV EHDLRLVVLA ALLCLFASFS SISLFARARE AGLRQRSLWV LASGFVAGCG
IWATHFIAML AFQPETPTSY QPGLTFASLM IAIMFATIGF AIADRYRPSG TGGAVVGLSI
GAMHYVGMAA TSMHGQMIWD RDYVAASIVL GVVLGAAATQ AAGSLSGLRG RIIGAGLLTL
AIASLHFTGM AAVTVSYDAA AQVASNAVEP YTVAIAVAAV TLLIVILAFV GSAVERHLAD
RSVQETIRLR AHVLELDETR KQLEKTSAEL LVALQSASSA DQAKSQFLAT MSHELRTPLN
AILGFSEIMA AETFGPLNNA RYSDYVQDIF KSGKHLLSLI NDVLDFTRVD AGELHLHEED
IDLEEAVTDT IRMISAQAKA QNIALDYEIA ADLPHLIADH RRIRQVLLNL LSNAVKFTPD
GGEVHIGALV ADGAMLLRVT DTGIGIAAEN IPLALERFGQ IDSDLSRKYE GTGLGLPLAK
CLMEHHGGCL DIASELGRGT TVTVTFPPER VVAAAQHPLP MRA
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