Gene Plav_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1920 
Symbol 
ID5455927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2090630 
End bp2091160 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content56% 
IMG OID640877497 
Productmethyltransferase type 11 
Protein accessionYP_001413192 
Protein GI154252368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.657915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCGT ATGACAGGCA GACCTACAAC GCTCCAAATC CAATGGCGCG TCTCGCACAT 
CGGGCGCGTT ACGGAAATGC GGATAGGCTT ATCGCCAAGT ATCTGAAGCC CGATGGCGTG
ATGCTCGATT ACGGTTGCGG CGATGGACGT ATGTTACGCC GCGTCCGGGA ATTTGCTCCG
GCCGCCGATC TCATCGGCTA TGAACCCCTG ATGCAGGGGG AAGGCGAGGG GTACAGGCGC
TTTACGCATG AAGAAGACGC CAGAGGGTGT CGCTATGATC TGGTAACCGC CTTTGAGGTT
CTGGAACACC TGTTGCCGGA AGACATCGGC AAATTTGTGA CACTCACCAA GGACACCATC
AAGGCCGATG GCCGTGTGAT CATAAGTGTG CCGATCATGC TGGGGCCGGT TCTCATCCCC
AAGGTGATAA ATGCGCAGTT CATTCGCAAG TCAGCCTGGA AATACAGCTT TTCCGAACTT
GTGCGGGGGG CGATTTTCCT CAAACCGGTG CCGCGTTACC ACGGTTCGTA A
 
Protein sequence
MVAYDRQTYN APNPMARLAH RARYGNADRL IAKYLKPDGV MLDYGCGDGR MLRRVREFAP 
AADLIGYEPL MQGEGEGYRR FTHEEDARGC RYDLVTAFEV LEHLLPEDIG KFVTLTKDTI
KADGRVIISV PIMLGPVLIP KVINAQFIRK SAWKYSFSEL VRGAIFLKPV PRYHGS