| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1895 |
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| Symbol | |
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| ID | 5456166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2057222 |
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| End bp | 2058688 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877472 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_001413167 |
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| Protein GI | 154252343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.200594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTAA AAAGCCCGGA TATTCAATCG CTTGTCGAGG GGCTCGGCCA TGCGCGGGTG
GCGCTTGCCG GCGATGTCAT GCTCGACCGT TTCGTCTATG GCCATGTAGA GCGGATCTCG
CCGGAGGCGC CGATCCCCGT GCTGCGGGTG GATGAGGAGC GGGCGATGCC GGGCGGTGCG
GGCAATGTGG CGCGCAATCT CGCCGCGCTC GGGGCCGAGG TCACCTTTCT CTCGGCGGTT
GGCGACGATG AAGCGGGCGC CGACCTGAAG GCGGCACTCG AGCGCGAGGG CGGCATCGAG
GCGGCGCTCA CCGTCGTTCC GGGCCGGACC ACGACCCAGA AAACCCGCTT CGTCGCGATG
AGCCAGCAGA TCCTGCGTGC CGACCGCGAG ACGACGCAAC CGCTCGATGC GGCATCGGCG
GAAAGGCTTC TCGCCGCGCT CACCTCCGCA CTGAAAGACC GGCAGGTGCT TGTGTTGTCC
GATTACGGCA AGGGAGTGCT GACGCCTGCC TTCGCGCGCG GCGCGATTGC CGCCGCCAGG
GCGGCCGGCA TTCCCGTGAT CGTCGATCCC AAGGGCCGCG ATTATTCACT CTATGCGGGC
GCAAGCGTCG TAACGCCGAA CCGCAAGGAA CTCGGCGAGG CGACGGGCGC CGCCGTCGAT
ACGGATGAGG AAATCGTTGC CGCCGCGCGC GCGCTCATGA AAGCGCATGA CATCGGCGCC
GTTGTCGTAA CGCGGGCACA GGCGGGCATG AGCGTCATCA CTGCGGATGG CGCGGTTACG
CATCTCAAGG CGGAAGCACG GGAAGTGTTC GACGTGTCGG GTGCGGGAGA TACGGTCGTC
TCCACGCTCG CCGCCGCGCT CGGCACCGGC CTCACGCTGG CGGAGGCGGC GGGTCTCGCC
AATTCTGCGG CGGGCATCGT CGTCGGCAAG GTTGGCACCG CCGTGGTGCA CCAGGACGAG
CTTCTGGCGA AATTGCGCGA ACGCGAACTC TCCATGCTCG AAGCCAAGGT CGCCGGTCTC
AAAAGCGCCG AGGACATCGT GGCGGGCTGG CGTGCGCGCG GGCTCACGGT CGGCTTCACC
AATGGCTGCT TCGATCTTCT GCATCCTGGA CATGTAACGC TGCTGGAGCG GTCGCGCGCG
CTGTGCGACA GGCTCGTCGT CGGCCTCAAC AGCGATGCAT CCGTCAGCCG CCTCAAGGGG
CCGGAGCGTC CCGTCCAGCC GGATATCGCG CGGGCAACCG TGCTTGCGGC CCTCGCCTCT
GTCGATCTCG TGGTGATTTT CGAAGAGGAT ACGCCGGAGG CGCTCATCAA GGCGCTCAGG
CCCGATATTC TGGTCAAGGG CGGCGACTAC ACGATAGACA AGATCGTCGG CGCCGATTTC
GTGCAGGCGC ATGGCGGACG CGTCGAGATC GTCGACATCG TGCCGGGCTT CAGCACCACG
GGCACGCTCG CGCGTCTCAA GGGCTAG
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| Protein sequence | MTVKSPDIQS LVEGLGHARV ALAGDVMLDR FVYGHVERIS PEAPIPVLRV DEERAMPGGA
GNVARNLAAL GAEVTFLSAV GDDEAGADLK AALEREGGIE AALTVVPGRT TTQKTRFVAM
SQQILRADRE TTQPLDAASA ERLLAALTSA LKDRQVLVLS DYGKGVLTPA FARGAIAAAR
AAGIPVIVDP KGRDYSLYAG ASVVTPNRKE LGEATGAAVD TDEEIVAAAR ALMKAHDIGA
VVVTRAQAGM SVITADGAVT HLKAEAREVF DVSGAGDTVV STLAAALGTG LTLAEAAGLA
NSAAGIVVGK VGTAVVHQDE LLAKLREREL SMLEAKVAGL KSAEDIVAGW RARGLTVGFT
NGCFDLLHPG HVTLLERSRA LCDRLVVGLN SDASVSRLKG PERPVQPDIA RATVLAALAS
VDLVVIFEED TPEALIKALR PDILVKGGDY TIDKIVGADF VQAHGGRVEI VDIVPGFSTT
GTLARLKG
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