| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1872 |
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| Symbol | |
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| ID | 5455662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2033594 |
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| End bp | 2034787 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877450 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001413145 |
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| Protein GI | 154252321 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.364161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG CCTATGGGCC CGAATACGAG GCCTTTCGCG CGGAAGTGCG CAAGTTTACC
GAGACGCACA AGGACCAGGC GCCGAAACGC TTCGGCGTAT CGCGGCCGTC CGAAGAATCG
CTCGCCTGGC AGCGGCTGCT GCTCGAACAT GGCTATGCGG CGCGGACGGT GCCGAAGGAA
TATGGCGGCT ATGGCGCGGA GCCGGATATC CTGAAGTCGC GGATCATCGC GGAGGAGTTC
ACGCGGGCGA AGCTGCCGAT GGGGCTGGCG AGCCAGGGCA TTTCGATGCT GGTGCCGACG
CTGCTGGAAC TCGGTACGGA AGAGCAGAAG AAGAAATGGA TCGCGCCGAC GCTCCGGGGC
GAAGTGATCT GGTGCCAGGG CTATTCGGAG CCTGGATCGG GCTCGGACCT TGCCTCGCTG
CAAACGAAGG CGACGGAAGA CGGCGACGAT TTCATTATCA ACGGGCAGAA GATATGGACC
TCGACGGCGC ATGCGTCGGA CATGATTTTC TGCCTTGTGC GGACGGAGCC GGACAAGCCG
AAGCATGAAG GCATTTCCTA TCTGATCTTT CCGATGACGA CGCCCGGCAT CGAGGTGCGG
CCGCTGAAGA CGATGACGGG GCACGCGGAA TTCAACGAGG TGTTCTTCAC CGATGTGCGC
GTACCGCAGA AGGACATCGT GGCGGGGCGC GGCCAGGGTT GGTTCGTCGC CAACGCCACG
CTGAAGCATG AACGCGGGAT GCTGGGCGAT CCGAACCAGG CGGGTACGCG GCTGAAGGAC
ATCATCGACC TCATGCATGA GGAGACGGTG GGCGGGGAGC GGCTGATCGA CAATCCGCTT
TACCGCGACC GGCTGGTGCA TCTGCAGAGC CGTGTGCTCG CCATGCAGTT TCACGGGCTG
CGGCTGCTGA CGGCTTCCGC GAAGAAGGAA GACCCCGGCA TCGCGCGGCT GATCGTCAAA
TTGCAGGGCT GCGAGATCAA CCACCAGCTT GCGGCGCTCG CCATCGACGC GCTGGGCGAG
CTTGGCGTGC TTTACGAGGA CAGCCCGCAT TTGCGCGCGC GGGGGAGCTG GCAGCATCGC
TACATGTTCG ATCTCGGCCT CATCATTGGC GGCGGCACGG CGCAGATCCA GAAGAACATC
ATTTCGGAAC GCGGCCTCGG CATGCCGCGT GAACCGAAGC TCGTGAAAGC GTAA
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| Protein sequence | MDLAYGPEYE AFRAEVRKFT ETHKDQAPKR FGVSRPSEES LAWQRLLLEH GYAARTVPKE
YGGYGAEPDI LKSRIIAEEF TRAKLPMGLA SQGISMLVPT LLELGTEEQK KKWIAPTLRG
EVIWCQGYSE PGSGSDLASL QTKATEDGDD FIINGQKIWT STAHASDMIF CLVRTEPDKP
KHEGISYLIF PMTTPGIEVR PLKTMTGHAE FNEVFFTDVR VPQKDIVAGR GQGWFVANAT
LKHERGMLGD PNQAGTRLKD IIDLMHEETV GGERLIDNPL YRDRLVHLQS RVLAMQFHGL
RLLTASAKKE DPGIARLIVK LQGCEINHQL AALAIDALGE LGVLYEDSPH LRARGSWQHR
YMFDLGLIIG GGTAQIQKNI ISERGLGMPR EPKLVKA
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