Gene Plav_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1831 
Symbol 
ID5454795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1982131 
End bp1983429 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content56% 
IMG OID640877410 
Producthypothetical protein 
Protein accessionYP_001413105 
Protein GI154252281 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA ACGAGAGCCC TATGGCTAAC CATGACCATA TCGAACGCGC CTGCCAGCTG 
GGCCGACCCA GCAGCGAGAA GGGCAAGAAC ACCACCCCAG GCGGCGTAAT GCTGGGCCGC
AACCTCGTTG TGTGTTGCGA CGGCACCAGC AATGAGATTG GCAAGCAGTT GTCGAACGTA
TTGAAGCTCT ATCGGATTGC CGAGAAGAGT GAACGGCAGA TCGTTTTCTA CCAGCCCGGC
ATTGGCACGG TTTCCATGCC CAACAACTGG GGTAAGTGGA AGCAGAAATT GAGGTCGACT
TTTGAGATGG CGACCGGGCA TGGACTCGAT CGAGATGTCT TGAATGCCTA TTGCTTCCTC
GCGCGTCACT ATCGTGATGG CGATCGGATT TTCTTGTTCG GGTTCAGTCG GGGCGCATAT
ACCGTGAGCG TCGTGGCAGG CGTCATTTAC CTCATCGGGT TATTGCGCGA ACATCAGGTG
AATTTCGCAA GCTATGCACT CAAGGCCTAT AAACAGGCCA GTGCAGTTGA TGACTATGCA
GTCGCTCGCG AGTTCAACGA AATCGCCCTG CCGCAATGCG TGCCCATCCA TTTTCTTGGG
CTCTGGGATT CTGTGGCCTC GGTGATCGTG CCAGGCCGTC TGTTTTGGTC GAAGCTGCGG
CTCGAGGAGC TACCATTCAC TTCGACGAAT CCAGCGGTTT CCACGCTTCG TCAGGCGATA
GCAATTGACG AGTTCCGCCG CATGTTCCGT GTTCAGCGCT GGATCGAACC GCAGCAATTC
AAACCCAACC GTCATTCCCA AAGCAAGACC ATTCCGGTGC AAGACAGCCG GCAAGTTTGG
TTTGCGGGCT GTCATTCGGA TATTGGCGGC GGCTTTGTGG AAGAAGAAAG CGCGCTGTCC
AAGTATCCGT TGCGATGGAT GCTCGAGCAG GCCGCCGACA AAGGGCTTCG CATTCGGCGC
ACCATGCTCA ACCACATCGT CCTCGGAAAG GAGCGCAAAC ATGCCCGGCG CTATACTGCA
CCCGACCCCA AAGGCCGGTT GCATCACTCG TTGAACAAGA TGTGGTGGCC GTTCGAATGG
TGGCCGAAAA ATGTGCGCCG TCGTGACTGG CACGACCGGC ATACTTTGTG GGGCTATTAT
CTCCCCCGAG GCGAACCGCG CTTTATCGCA CCCGACAGCC TCGTTCACAT CTCGGTCGTC
GACCGGCTCC GCGTGGTTCC GTCTGATCGC CCGGTCAATC TGAGATTGCC CTATCGGATT
GAATCCATGA CCGGTCCAAT TTCGGCGAAG CGAAAGTGA
 
Protein sequence
MAKNESPMAN HDHIERACQL GRPSSEKGKN TTPGGVMLGR NLVVCCDGTS NEIGKQLSNV 
LKLYRIAEKS ERQIVFYQPG IGTVSMPNNW GKWKQKLRST FEMATGHGLD RDVLNAYCFL
ARHYRDGDRI FLFGFSRGAY TVSVVAGVIY LIGLLREHQV NFASYALKAY KQASAVDDYA
VAREFNEIAL PQCVPIHFLG LWDSVASVIV PGRLFWSKLR LEELPFTSTN PAVSTLRQAI
AIDEFRRMFR VQRWIEPQQF KPNRHSQSKT IPVQDSRQVW FAGCHSDIGG GFVEEESALS
KYPLRWMLEQ AADKGLRIRR TMLNHIVLGK ERKHARRYTA PDPKGRLHHS LNKMWWPFEW
WPKNVRRRDW HDRHTLWGYY LPRGEPRFIA PDSLVHISVV DRLRVVPSDR PVNLRLPYRI
ESMTGPISAK RK