Gene Plav_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1823 
Symbol 
ID5457045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1977168 
End bp1977689 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content54% 
IMG OID640877402 
Producthypothetical protein 
Protein accessionYP_001413097 
Protein GI154252273 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCGA ACCCAGAGAG GGCCAGAGAA GCCGCCCGCG CGGTCTTGCA AGACTTCGGG 
GTAAAAGGTG TGCCTGTTCC GGTCGAGCGC ATTATCAAGA CAAGAAACAT TGTTCTTCAA
TACGCTCCGC TTGAGGAAGA CCTCTCCGGA ATGGCCTATA TTAAAGATGG AGTTGGGATC
ATCGGGGTCA ACGCCCTGCA TCATCCCAAC CGGCAACGAT TCTCGGCGGC ACATGAGTTG
GCTCATCATG TGCTGCATGC GCCAGAGATT CAGAAATCCG TTCATATCGA CAAGGGATTT
CGCGTCTTGC TGCGTGACGA CGTCTCTTCG CAGGGCATTG ATCCGTTGGA AATTGAAGCC
AACGCTTTCG CATCTGAACT GTTGATGCCG CAGGAATTCT TGATGGACGC GCTGGACGCA
AGCGGTCTGG ATATCGAGGA TGATTCGGGC ATTGAAGCGT TAGCCCGCAA ATTTAGGGTA
AGCGCCTCTG CGATGCGATA TCGCTTGGCG GGCCGCTTCT AG
 
Protein sequence
MKANPERARE AARAVLQDFG VKGVPVPVER IIKTRNIVLQ YAPLEEDLSG MAYIKDGVGI 
IGVNALHHPN RQRFSAAHEL AHHVLHAPEI QKSVHIDKGF RVLLRDDVSS QGIDPLEIEA
NAFASELLMP QEFLMDALDA SGLDIEDDSG IEALARKFRV SASAMRYRLA GRF