Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1801 |
Symbol | |
ID | 5454304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1957185 |
End bp | 1957754 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877381 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001413076 |
Protein GI | 154252252 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.198722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATG AAACGCCCAG GGTTCCCCTG CTGTCGATGG CGGAAGCGGC GGCCGCGGCC GCGAAGGCCG GCATATCCGA ACAAATGGCG CCACTCAGCG TCTTCAGGGT CTTGCTCCGG CATCCCGATG TAGCGAGCGA GCTTGCCTCG ACGCTGAACA CCCTGCTTTT CCAGGGCAAC AAGCTCGATG CAAGACTGCG CGAACTCATC ATCATGCGTA TCGGCTGGAA GACAAAATCG CTCTATGAAT GGACACAACA TTGGCGGGTC GCCCGCATGC TGGACATTCC GGAGGCGGAT CTGGTCGCCA CGCGGGATTG GAAAAATGCT TCCTGCCTGT CAGACGCCGA CCGCGCCGTT CTCGCCGCGA CCGACGAGAC GCTCGACGGC GGCATGATTT CGGACGCCAC ATGGACTGCC TGTGCGGCAC ACCTGAAAAC GGCCGAAGAA CGCATCGAAC TGGTTGTCGC CATCGGCAAC TGGACGCTTT TCTCGCAACT GCTCAAAAGC CTGAAAATCC CGCTTGAGGA TGGCGTCGTC GCCTGGCCAC CGGATGGCAA GAAGCCTTGA
|
Protein sequence | MTDETPRVPL LSMAEAAAAA AKAGISEQMA PLSVFRVLLR HPDVASELAS TLNTLLFQGN KLDARLRELI IMRIGWKTKS LYEWTQHWRV ARMLDIPEAD LVATRDWKNA SCLSDADRAV LAATDETLDG GMISDATWTA CAAHLKTAEE RIELVVAIGN WTLFSQLLKS LKIPLEDGVV AWPPDGKKP
|
| |