Gene Plav_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1794 
Symbol 
ID5454683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1948601 
End bp1949413 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content60% 
IMG OID640877374 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001413069 
Protein GI154252245 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.836656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG AACCGGCCCT GCTCGAAAAA AAGGGCCATA TCGCGCTGAT CACGCTCAAC 
CGCCCGGAAG CGCGCAACTC GTTCAGTCCG GAGATGTTGG TCAGGCTTGC CGGTCATTGG
GAAGAGGTGC GCGACGACGC GAATATCCGC GTCGCCATCG TCACCGGCGC CGGAGACAAG
GCGTTTTGTT CGGGCGCGGA TCTCGGGCAA CTCATCCCGC TCATAAATGG CGCACGCAAA
CCGCAAAACG AATGGGATCA GAAAATTCTG GCTGATCCGA ATATCCTGGC CAAGGGCTTG
TTGCGCACAT TCGATGTGAC AAAGCCGGTC ATCGCCGCGA TCAACGGCTT TGCCGTCGCA
GGCGGAATGG AGTTGGCGCA AGGAACGGAC ATGCGTATCG CTGCGGATAC GGCAAAGCTC
GGTGTGCAGG AAGTCAAATG GGCGATTTTT CCGGGCGGCG GCTCAACGGT GCGCCTTCCG
CGCCAGATAC CTTATGCAAG GGCGATGGAA CTGCTGCTCA CCGGCGACCT GATCAGCGCG
CAGGAAGCCT ACGATCTGGG ATTCCTGAAT CGTGTCGTCC CCCAAAACCA GGTGCTCGAC
GCGGCATTCG AACTCGCGGA GAAGATCGCC GCGAATGGGC CGATCGCCGT TCAGGCAATT
CGCAAATCCG CCCGCGAATG TCTGGGTCGC CCCGAGAGCG AGGCGATGGG TATGGAGTCG
CGCTTCGCAG CACCCGTGTT CAAGACCGAG GATGCCCGCG AGGGGCCCAA GGCATTCATG
GAGAAGCGCA GGCCTAACTA TAAGGGCCGC TGA
 
Protein sequence
MTMEPALLEK KGHIALITLN RPEARNSFSP EMLVRLAGHW EEVRDDANIR VAIVTGAGDK 
AFCSGADLGQ LIPLINGARK PQNEWDQKIL ADPNILAKGL LRTFDVTKPV IAAINGFAVA
GGMELAQGTD MRIAADTAKL GVQEVKWAIF PGGGSTVRLP RQIPYARAME LLLTGDLISA
QEAYDLGFLN RVVPQNQVLD AAFELAEKIA ANGPIAVQAI RKSARECLGR PESEAMGMES
RFAAPVFKTE DAREGPKAFM EKRRPNYKGR