| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1789 |
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| Symbol | |
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| ID | 5453565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1943164 |
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| End bp | 1943946 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877369 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001413064 |
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| Protein GI | 154252240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.17043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.157768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG CCGTGTCTCT GAAATCGCGT TGGGCGGCTG GAGAGGTGAC ATTCGGCGCC
TGGTGCATGA TGCCCGGCGC GCTCGGAGTC GAGGCCGTTT CGTCGCTTGG CTTCGACTGG
ATACTCGTCG ATATGCAGCA TGGCTGCATG GACTACGGAC AGGCGCTTGA TATGATCCGC
GCCGCTGACA TTCGCGGACT TCCAGCAATT GTACGCGTGC CCTGGAACGA GCCGGGAATC
GTCGGCCGCG TTCTGGACGC GGGTGCCCTT GGCGTCGTCG CTCCGATGAT TCAGACGGCC
GACGATGCGA GGAGTTTGGT TGACTCCTGC CGCTATCCGC CGGTGGGGCG CCGCAGCTTC
GGGCCTGTGC GTGTCGGAAC GCGCGACGGC GCGGGGTATG CCTTCACGGC CAATGACCGT
GTTGCCGTCG TTCCGATGAT TGAGACGCGC TCCGCGCTCG ATCAGGTCGA TGAAATCGTC
GGCTTGCCGG GGGTCGATGC CGCCCTGGTG GGGCCGTTCG ACCTTTCGGT CGCGCTTGGT
CTGCCGCCGG GAGACAATGA CGGAAAGCCT GCTTTCGACG ATGCCATAAA GACTGTTGTC
GCTGCCTGCC GGCGGCACGG CAAGGCGGTA GCCGTCCTGT CGAACGCGAT CGTCGCGCCG
CTGCGCGTCG CGCAGGGGTT TCAAATGATC TCGGTTACGA CGGACATCGC GGCGCTCTCT
TCGGCGAGCA TGGCGAGTCT CACGGCTGTG AAAGAAAAAA CTGGAACAAA AAATGCTGGA
TAG
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| Protein sequence | MAEAVSLKSR WAAGEVTFGA WCMMPGALGV EAVSSLGFDW ILVDMQHGCM DYGQALDMIR
AADIRGLPAI VRVPWNEPGI VGRVLDAGAL GVVAPMIQTA DDARSLVDSC RYPPVGRRSF
GPVRVGTRDG AGYAFTANDR VAVVPMIETR SALDQVDEIV GLPGVDAALV GPFDLSVALG
LPPGDNDGKP AFDDAIKTVV AACRRHGKAV AVLSNAIVAP LRVAQGFQMI SVTTDIAALS
SASMASLTAV KEKTGTKNAG
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