| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1777 |
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| Symbol | |
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| ID | 5456242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1929990 |
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| End bp | 1930865 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877357 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001413052 |
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| Protein GI | 154252228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0284717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAA ACCGGACCTT GTTCATCCTT GCCCAAAATC TCAAAATCGC GGCGGACGCA
TTCGGCCCCG ACCAGGCGCG TCCGGTTATG CTCGCCCATG GCGGCGGGCA GACACGCCAT
GCTTGGCAAG CCTGCGGTAG AAGGTTGGGG GAAAACGGGT ATTACGCCCT CTCCGTCGAT
TTGCGCGGGC ACGGCGAAAG CGACTGGTCT CCGGACGGAG ACTACAGGAT GGAGCGTTTC
GCGGAGGATC TCCTCGACGT CGCGGACGGC TTCTCCGTGC CTCCTGTCCT GGTCGGCGCA
TCTCTGGGCG GCATCGCGGG CATGATCGCG CAGGGAGAAT ACGCAAAGGC CGGACGGCGC
GGGTTTGCGG CGCTGGTCCT TGTCGACATC ACCCCTCAGA TGAACATGGA GGGGGTTCAA
AAAATCCTCG GATTCATGGC GTCAAATCTG GAAGAAGGCT TCGCCTCGCT TGAGGAAGCA
GCCGATACGA TCTCGCGCTA CATGCCCGGT CGGCCTCGCC CCAAAAACCT GAGCGGACTG
GCGAAGAACC TTCGCCTCAG GGAAAACGGC CGCTACTACT GGCATTGGGA TCCACGTTTC
ATCACCGGCA CACAAAAGCC GCAAGGCAGC CGCGAACCCG AACGCCTCCA AATGGCGGCA
CGTTCCCTGA AAATACCGAC GCTCCTTGTC CGGGGCCGCG ACAGCGACCT CGTGACGGTC
GAAGCGGCGC GGCAATTCGC CGAAATTGTT CCTCATTCCG AGTTTATCGA TGTCGCAAAT
GCGGGCCATA TGGTAGCGGG CGACAAGAAC GACATATTTA CAAGCGCCGT TCTGGATTTT
CTGACGCGAA TGGCGCCTGC CGCGAGCACA TCGTAG
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| Protein sequence | MSANRTLFIL AQNLKIAADA FGPDQARPVM LAHGGGQTRH AWQACGRRLG ENGYYALSVD
LRGHGESDWS PDGDYRMERF AEDLLDVADG FSVPPVLVGA SLGGIAGMIA QGEYAKAGRR
GFAALVLVDI TPQMNMEGVQ KILGFMASNL EEGFASLEEA ADTISRYMPG RPRPKNLSGL
AKNLRLRENG RYYWHWDPRF ITGTQKPQGS REPERLQMAA RSLKIPTLLV RGRDSDLVTV
EAARQFAEIV PHSEFIDVAN AGHMVAGDKN DIFTSAVLDF LTRMAPAAST S
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